DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2852 and ppwd1

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_002934239.3 Gene:ppwd1 / 100488042 XenbaseID:XB-GENE-1001509 Length:640 Species:Xenopus tropicalis


Alignment Length:174 Identity:77/174 - (44%)
Similarity:102/174 - (58%) Gaps:12/174 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VVVADDSKGPK-VTEKVFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGSKFH 79
            |:.|..::|.| |::......::|.     |.:.||....|||||||   .:..:...|....||
 Frog   472 VMAATQAEGSKRVSDSAIIHTSMGD-----IHVKLFPVECPKTVENF---CVHSRNGYYNRHMFH 528

  Fly    80 RIIKDFMIQGGDFTKGDGTGGRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTKQ 143
            |:||.||||.||.| |.|.||.||:|..|||| :..|:|.....|||||||..|||||||:|...
 Frog   529 RVIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHATLRHDRPYTLSMANAGPSTNGSQFFLTVVP 592

  Fly   144 TSWLDGRHVVFGKILSGMNVVRQIENSATDAR-DRPVKDVVIAN 186
            |.|||.:|.|||::..||.||::|.||..:.: |:|.:|:.|.|
 Frog   593 TPWLDNKHTVFGRVTKGMEVVQRICNSKVNPKTDKPYEDISIIN 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 72/159 (45%)
ppwd1XP_002934239.3 WD40 83..312 CDD:475233
WD40 repeat 88..125 CDD:293791
WD40 repeat 131..169 CDD:293791
WD40 repeat 177..213 CDD:293791
WD40 repeat 221..266 CDD:293791
cyclophilin_WD40 489..637 CDD:238908 72/157 (46%)
Blue background indicates that the domain is not in the aligned region.

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