DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3732 and AT5G25490

DIOPT Version :10

Sequence 1:NP_611692.1 Gene:CG3732 / 37588 FlyBaseID:FBgn0034750 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_197931.1 Gene:AT5G25490 / 832624 AraportID:AT5G25490 Length:170 Species:Arabidopsis thaliana


Alignment Length:155 Identity:45/155 - (29%)
Similarity:57/155 - (36%) Gaps:57/155 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GGVA----SGAAGSSGVAS----------PGDWICPDYDCRHLNFARRLQCNKCDRDRDGSDKPE 56
            ||::    ||..|....:|          ||||.|...||...|||.|..|.||     |:.|.|
plant    32 GGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDWYCNLGDCGTHNFANRSSCFKC-----GAAKDE 91

  Fly    57 RDRDRDRERERGNGSSSSSSSSSKKKLGTEIGKAAADKSRGLF-----------------SAEDW 104
                          .|.||::::...:...:|     ..||||                 .:.||
plant    92 --------------FSCSSAAATTGFMDMNVG-----PRRGLFGFGGSSSGGGGTGRSPWKSGDW 137

  Fly   105 QC--SKCANVNWARRQTCNMCNAPK 127
            .|  |.|...|:|.|..|..|||||
plant   138 ICPRSGCNEHNFASRSECFRCNAPK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3732NP_611692.1 RanBP2-type Zn finger 24..45 CDD:275376 9/20 (45%)
zf-RanBP 100..129 CDD:395516 14/30 (47%)
RanBP2-type Zn finger 104..123 CDD:275376 8/20 (40%)
AT5G25490NP_197931.1 RanBP2-type Zn finger 7..26 CDD:275376
RanBP2-type Zn finger 64..85 CDD:275376 9/20 (45%)
zf-RanBP 133..164 CDD:395516 14/30 (47%)
RanBP2-type Zn finger 137..158 CDD:275375 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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