DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3732 and Fus

DIOPT Version :10

Sequence 1:NP_611692.1 Gene:CG3732 / 37588 FlyBaseID:FBgn0034750 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001012137.1 Gene:Fus / 317385 RGDID:1308864 Length:518 Species:Rattus norvegicus


Alignment Length:182 Identity:46/182 - (25%)
Similarity:60/182 - (32%) Gaps:72/182 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GGVASGAAGSSGVASPGDWICPDYDCRHLNFARRLQCNKCDRDRDGSDKPERDRDRDRERERGNG 70
            ||..||..|..|....|||.||:..|.::||:.|.:||:|.     :.||:           |.|
  Rat   401 GGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRSECNQCK-----APKPD-----------GPG 449

  Fly    71 SSSSSSSSSKKKLGTEIGKAAADKSRGLFSAEDWQCSKCANVNWARRQTCNMCNAPKFSDVEERT 135
            ....         |:.:|....|..||                                    |.
  Rat   450 GGPG---------GSHMGGNYGDDRRG------------------------------------RG 469

  Fly   136 GFG-GGYNDRGVVEYKDRQD-----SDSEYDEFGRRKKRKHGEHREDSK-RP 180
            |:. |||..||    .||..     ...:...||..|....||||:|.: ||
  Rat   470 GYDRGGYRGRG----GDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERP 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3732NP_611692.1 RanBP2-type Zn finger 24..45 CDD:275376 9/20 (45%)
zf-RanBP 100..129 CDD:395516 0/28 (0%)
RanBP2-type Zn finger 104..123 CDD:275376 0/18 (0%)
FusNP_001012137.1 RRM_FUS_TAF15 276..361 CDD:409951
zf-RanBP 415..442 CDD:395516 12/31 (39%)
Blue background indicates that the domain is not in the aligned region.

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