DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3732 and Fus

DIOPT Version :9

Sequence 1:NP_611692.1 Gene:CG3732 / 37588 FlyBaseID:FBgn0034750 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001012137.1 Gene:Fus / 317385 RGDID:1308864 Length:518 Species:Rattus norvegicus


Alignment Length:182 Identity:46/182 - (25%)
Similarity:60/182 - (32%) Gaps:72/182 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GGVASGAAGSSGVASPGDWICPDYDCRHLNFARRLQCNKCDRDRDGSDKPERDRDRDRERERGNG 70
            ||..||..|..|....|||.||:..|.::||:.|.:||:|.     :.||:           |.|
  Rat   401 GGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRSECNQCK-----APKPD-----------GPG 449

  Fly    71 SSSSSSSSSKKKLGTEIGKAAADKSRGLFSAEDWQCSKCANVNWARRQTCNMCNAPKFSDVEERT 135
            ....         |:.:|....|..||                                    |.
  Rat   450 GGPG---------GSHMGGNYGDDRRG------------------------------------RG 469

  Fly   136 GFG-GGYNDRGVVEYKDRQD-----SDSEYDEFGRRKKRKHGEHREDSK-RP 180
            |:. |||..||    .||..     ...:...||..|....||||:|.: ||
  Rat   470 GYDRGGYRGRG----GDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERP 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3732NP_611692.1 ZnF_RBZ 22..46 CDD:197784 11/23 (48%)
RanBP2-type Zn finger 24..45 CDD:275376 9/20 (45%)
zf-RanBP 100..129 CDD:279035 0/28 (0%)
RanBP2-type Zn finger 104..123 CDD:275376 0/18 (0%)
FusNP_001012137.1 RRM <257..>367 CDD:223796
RRM_FUS_TAF15 276..361 CDD:240979
zf-RanBP 415..442 CDD:279035 12/31 (39%)
RanBP2-type Zn finger 419..440 CDD:275376 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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