DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3732 and zranb2

DIOPT Version :9

Sequence 1:NP_611692.1 Gene:CG3732 / 37588 FlyBaseID:FBgn0034750 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001136134.1 Gene:zranb2 / 100135715 XenbaseID:XB-GENE-966832 Length:356 Species:Xenopus tropicalis


Alignment Length:304 Identity:124/304 - (40%)
Similarity:166/304 - (54%) Gaps:65/304 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPGDWICPDYDCRHLNFARRLQCNKCDRDRDGSDKPERDRDRDRERERGNGSSSSSSSSSKKKLG 84
            |.|||||||..|.::|||||..||:|.|::                        ::.:...|..|
 Frog     9 SDGDWICPDKKCGNVNFARRTSCNRCGREK------------------------TTDAKMMKAGG 49

  Fly    85 TEIGKAAADKSRGLFSAEDWQCSKCANVNWARRQTCNMCNAPKFSDVEERTGFGGGYNDRGVVEY 149
            |||||..|:||||||||.||||..|.|||||||..|||||.||::.:|||||:|||:|:|..|||
 Frog    50 TEIGKTLAEKSRGLFSANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEY 114

  Fly   150 KDRQDSDSEYDEFGRRKKRKHG----------------------------------EHREDSKRP 180
            .:|::||.|||||||:||:..|                                  |..|:.:..
 Frog   115 IEREESDGEYDEFGRKKKKYRGKPAVPKSILKGDEKESEGEEEEDEDLSKYKLDDDEEEEEEEEE 179

  Fly   181 RRSSRDEQRNDEEEDEDDDEGDDE--DLSKYDLWGDEEVTSTDVKSKEGTGNGDKERKRTSRDST 243
            :...:|::..:|||::||||.||:  |||||:|..::|..|.:.||...:.:..:...|:||.|:
 Frog   180 KEKEKDKKTKEEEEEDDDDEEDDDDGDLSKYNLASEDEDDSKNKKSTHSSRSKSRSHSRSSRSSS 244

  Fly   244 SSVSSSSSSSSSSSSDSSSSSSSSS-----SSGGRRKTSSSGRR 282
            .|..|.|.|.|.|||.|.|.|.|||     |.|.:.::||...|
 Frog   245 QSSRSRSRSRSRSSSSSRSRSRSSSREYSRSPGSKSRSSSRSHR 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3732NP_611692.1 ZnF_RBZ 22..46 CDD:197784 15/23 (65%)
RanBP2-type Zn finger 24..45 CDD:275376 13/20 (65%)
zf-RanBP 100..129 CDD:279035 21/28 (75%)
RanBP2-type Zn finger 104..123 CDD:275376 13/18 (72%)
zranb2NP_001136134.1 ZnF_RBZ 11..35 CDD:197784 15/23 (65%)
RanBP2-type Zn finger 13..34 CDD:275376 13/20 (65%)
ZnF_RBZ 67..91 CDD:197784 17/23 (74%)
RanBP2-type Zn finger 69..88 CDD:275376 13/18 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I6038
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 224 1.000 Inparanoid score I3427
OMA 1 1.010 - - QHG60166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007371
OrthoInspector 1 1.000 - - oto102200
Panther 1 1.100 - - LDO PTHR12999
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3341
SonicParanoid 1 1.000 - - X5493
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

Return to query results.
Submit another query.