DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bonsai and RPS13

DIOPT Version :9

Sequence 1:NP_611691.1 Gene:bonsai / 37587 FlyBaseID:FBgn0026261 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_010349.3 Gene:RPS13 / 851636 SGDID:S000002471 Length:151 Species:Saccharomyces cerevisiae


Alignment Length:54 Identity:13/54 - (24%)
Similarity:24/54 - (44%) Gaps:10/54 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LAKMTAVIRRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLR-------RWDY 160
            |.|....:|:   |::::.:||..|.||..:..:..:..:|.|       .|.|
Yeast    91 LIKKAVSVRK---HLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKY 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonsaiNP_611691.1 Ribosomal_S15 97..172 CDD:278728 13/54 (24%)
RPS13NP_010349.3 PTZ00072 4..151 CDD:185427 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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