DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and SGV1

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_015487.1 Gene:SGV1 / 856290 SGDID:S000006365 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:355 Identity:143/355 - (40%)
Similarity:209/355 - (58%) Gaps:40/355 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHENVVN 112
            |.|.:..|:||||||||:|....:..:: |||||:::..||:.|||||.|||.||:.|.|:|::.
Yeast    58 NHYREDEKLGQGTFGEVYKGIHLETQRQ-VAMKKIIVSVEKDLFPITAQREITILKRLNHKNIIK 121

  Fly   113 LIEICR------TKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYY 171
            |||:..      |.|.::|.::| ||::..:...||:|:|.|..:...:.:||.:|.|:|.||.|
Yeast   122 LIEMVYDHSPDITNAASSNLHKS-FYMILPYMVADLSGVLHNPRINLEMCDIKNMMLQILEGLNY 185

  Fly   172 IHSNKILHRDMKAANVLITKHGILKLADFGLARA-FSIPKN-------ESKNRYTNRVVTLWYRP 228
            ||..|.:|||:|.||:||..:|:||||||||||. :..|.|       .|..:||:.|||.|||.
Yeast   186 IHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNLKYPGGAGSGAKYTSVVVTRWYRA 250

  Fly   229 PELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVW------PG 287
            |||:|||:.|...||:||.||:.||.:.:.||:||.|:..|...|.:|.|:.|.:.|      ||
Yeast   251 PELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLLGTPTEEDWAVARYLPG 315

  Fly   288 VEELELYKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPM 352
            .|        ....|.|..::||...|: .:||.|.|.:||.|||.||:.|.:|.:|.:|..||:
Yeast   316 AE--------LTTTNYKPTLRERFGKYL-SETGLDFLGQLLALDPYKRLTAMSAKHHPWFKEDPL 371

  Fly   353 PSDLSKM---------LSQHLQSMFEYLAQ 373
            ||:...:         :.::.:.|.:.|:|
Yeast   372 PSEKITLPTEESHEADIKRYKEEMHQSLSQ 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 135/318 (42%)
SGV1NP_015487.1 STKc_BUR1 50..366 CDD:270849 135/318 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346374
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000444
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104394
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R186
SonicParanoid 1 1.000 - - X3758
TreeFam 1 0.960 - -
87.730

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