DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and AT1G57700

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_176083.2 Gene:AT1G57700 / 842146 AraportID:AT1G57700 Length:692 Species:Arabidopsis thaliana


Alignment Length:369 Identity:138/369 - (37%)
Similarity:209/369 - (56%) Gaps:38/369 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVL---MDNEKEGFPITALREIRILQLLKHE 108
            ::.:||:..|||||:..|::||:.:.| :.||:|||.   ||.|...|   ..|||.||:.|.|.
plant   143 ADSFEKLEMIGQGTYSSVYRARDLETN-QIVALKKVRFANMDPESVRF---MAREIIILRRLNHP 203

  Fly   109 NVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIH 173
            ||:.|..:..:||:      .:.||:|::.:||||||.|...:|||..:||..|:|||.||.:.|
plant   204 NVMKLEGLIISKAS------GSMYLIFEYMDHDLAGLASTPGIKFSQAQIKCYMKQLLLGLEHCH 262

  Fly   174 SNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNY 238
            |..:||||:|.:|:|:.::..||:.||||:..:   :.:.|...|:|||||||||||||||..:|
plant   263 SCGVLHRDIKCSNLLLDRNNNLKIGDFGLSNFY---RGQRKQPLTSRVVTLWYRPPELLLGSTDY 324

  Fly   239 GPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVW--PGVEELELYKSIELPK 301
            |..||:|..|||:||::|..|::.|.||.:|:..|.:||||.:.:.|  ..:....::|    |:
plant   325 GVTVDLWSTGCILAELFTGKPLLPGRTEVEQMHKIFKLCGSPSEEYWRRSRLRHATIFK----PQ 385

  Fly   302 N-QKRRVKERLRPYVKD--QTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLSQH 363
            : .||.|.:..    ||  .:...||:.||.::|..|..|.:||..:||.|.|.||:.|.:....
plant   386 HPYKRCVADTF----KDLPSSALALLEVLLAVEPDARGTASSALQSEFFTTKPFPSEPSSLPRYQ 446

  Fly   364 LQSMF-----EYLAQPRRSNQMRNYHQQLTTMNQK----PQDNS 398
            .:..|     |..|:.|:.:..:...|:......|    |..|:
plant   447 PRKEFDAKLREEEARRRKGSSSKQNEQKRLARESKAVPAPSANA 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 123/307 (40%)
AT1G57700NP_176083.2 PKc_like 146..430 CDD:304357 123/304 (40%)
PTZ00024 152..443 CDD:240233 128/311 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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