DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and AT1G09600

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_172431.1 Gene:AT1G09600 / 837487 AraportID:AT1G09600 Length:714 Species:Arabidopsis thaliana


Alignment Length:364 Identity:140/364 - (38%)
Similarity:208/364 - (57%) Gaps:34/364 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVL---MDNEKEGFPITALREIRILQLLKH 107
            :::.:||:.||||||:..|:|||:.:.| :.||:|||.   ||.:...|   ..|||.||:.|.|
plant   159 KADSFEKLEKIGQGTYSSVYKARDLETN-QLVALKKVRFANMDPDSVRF---MAREIIILRRLDH 219

  Fly   108 ENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYI 172
            .||:.|      :...|:....:.||:|::.|||||||.|...:.||..:||..|:|||:||.:.
plant   220 PNVMKL------EGLITSRVSGSMYLIFEYMEHDLAGLASTPGINFSEAQIKCYMKQLLHGLEHC 278

  Fly   173 HSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRN 237
            ||..:||||:|.:|:|:..:..||:.|||||..:   :...|...|:|||||||||||||||..:
plant   279 HSRGVLHRDIKGSNLLLDHNNNLKIGDFGLANFY---QGHQKQPLTSRVVTLWYRPPELLLGSTD 340

  Fly   238 YGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKN 302
            ||..||:|..|||:||::|..|||.|.||.:||..|.:||||.:.:.|. :.:|. :.:|..|:.
plant   341 YGVTVDLWSTGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWK-ISKLP-HATIFKPQQ 403

  Fly   303 -QKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLSQHLQS 366
             .||.|.|..:..  ..:...|::.||.::|..|....:||..:||.|.|:.||.|        |
plant   404 PYKRCVAETFKSL--PSSALALVEVLLAVEPDARGTTASALESEFFTTSPLASDPS--------S 458

  Fly   367 MFEYLAQPRRSNQMRNYHQQL---TTMNQKPQDNSMIDR 402
            :.:|  |||:...::...::.   ...:.|..|:..:.|
plant   459 LPKY--QPRKEIDVKAQEEEAKRKKDTSSKQNDSKQVSR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 125/304 (41%)
AT1G09600NP_172431.1 STKc_CDK9_like 163..447 CDD:270832 125/300 (42%)
S_TKc 163..447 CDD:214567 125/300 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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