DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and AT5G63370

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_201142.1 Gene:AT5G63370 / 836456 AraportID:AT5G63370 Length:612 Species:Arabidopsis thaliana


Alignment Length:377 Identity:137/377 - (36%)
Similarity:205/377 - (54%) Gaps:45/377 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QQPSGSTPSNVGSSSSRTMSL---MEKQKYIEDYD-FPYCDES----------------NKYEKV 53
            :|...|:.|..|..|...:|.   ..::.|..|:| ..:.|:.                |:::|:
plant   236 EQQCYSSGSGSGHLSVEKLSADGNSGREYYSSDHDELEHEDQDSLTPGEMNMMFGSRSVNEFQKL 300

  Fly    54 AKIGQGTFGEVFKAREKKGNKKFVAMKKVLMD----NEKEGFPITALREIRILQLLKHENVVNLI 114
            .||.:||:|.|:|||::| .|:.||:||:.|.    .|:.|||:|:||||.||....|..:||:.
plant   301 NKINEGTYGIVYKARDEK-TKEIVALKKIKMKEDRFEEEYGFPLTSLREINILLSCNHPAIVNVK 364

  Fly   115 EICRTKATATNGYR-STFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHSNKIL 178
            |:      ...|.. :..|:|.:..||||.|::......||..|:|.:|.|||:||.|:|:|.|:
plant   365 EV------VVGGKNDNDVYMVMEHLEHDLRGVMDRRKEPFSTSEVKCLMMQLLDGLKYLHTNWII 423

  Fly   179 HRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYGPPVD 243
            |||:|.:|:|:...|.||:.|||:||.:..|...    ||..|:|.||||||||||.:.|...||
plant   424 HRDLKPSNLLMNNCGELKICDFGMARQYGSPIKP----YTQMVITQWYRPPELLLGAKEYSTAVD 484

  Fly   244 MWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQKRRVK 308
            ||..||||||:.::.|:..|.:|..||..|..:.|:....:|||.......|: :.|......::
plant   485 MWSVGCIMAELLSQKPLFPGKSELDQLQKIFAVLGTPNEAIWPGFSSFPNAKA-KFPTQPYNMLR 548

  Fly   309 ERLRPYVK-------DQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMP 353
            ::. |.:.       .:.|.|||:.||||||:||:..:.||||.:|...|:|
plant   549 KKF-PAISFVGGQILSERGFDLLNSLLTLDPEKRLTVEDALNHGWFHEVPLP 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 127/338 (38%)
AT5G63370NP_201142.1 STKc_CDC2L1 292..593 CDD:173741 124/313 (40%)

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