DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdc2cAt

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_198758.2 Gene:cdc2cAt / 833938 AraportID:AT5G39420 Length:644 Species:Arabidopsis thaliana


Alignment Length:323 Identity:140/323 - (43%)
Similarity:195/323 - (60%) Gaps:30/323 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDN-EKEGFPITALREIRILQLLKHEN 109
            ::..::|:.||||||:..||:|||.: ..|.||:|||..|| :.|.....| |||.||:.|.|.|
plant   101 KAEAFQKLEKIGQGTYSSVFRAREVE-TGKMVALKKVKFDNLQPESIRFMA-REILILRKLNHPN 163

  Fly   110 VVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIHS 174
            ::.|..|..::|:      |:.||||::.|||||||.||.:::|:..:||..|:|||.||.:.|.
plant   164 IMKLEGIVTSRAS------SSIYLVFEYMEHDLAGLSSNPDIRFTEPQIKCYMKQLLWGLEHCHM 222

  Fly   175 NKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNYG 239
            ..::|||:||:|:|:...|:|||.|||||...: |.|  ||:.|:||||||||.||||:|..:||
plant   223 RGVIHRDIKASNILVNNKGVLKLGDFGLANVVT-PSN--KNQLTSRVVTLWYRAPELLMGSTSYG 284

  Fly   240 PPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPK--- 301
            ..||:|..||:.||:....||::|.||.:||..|.:||||.....|         |..:||.   
plant   285 VSVDLWSVGCVFAEILMGKPILKGRTEIEQLHKIYKLCGSPQDSFW---------KRTKLPHATS 340

  Fly   302 -NQKRRVKERLRPYVKD--QTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPM---PSDLSK 358
             ..:...:..||...||  .||..||:.||:::|.||..|.:|||.::|.|.|.   ||.|.|
plant   341 FKPQHTYEATLRERCKDLSATGVYLLETLLSMEPDKRGTASSALNSEYFLTRPYACDPSSLPK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 133/307 (43%)
cdc2cAtNP_198758.2 STKc_CDK9_like 105..389 CDD:270832 133/303 (44%)
S_TKc 105..389 CDD:214567 133/303 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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