DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdk10

DIOPT Version :10

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001017622.2 Gene:cdk10 / 550285 ZFINID:ZDB-GENE-050417-94 Length:360 Species:Danio rerio


Alignment Length:338 Identity:135/338 - (39%)
Similarity:193/338 - (57%) Gaps:17/338 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALREIRILQLLKHE 108
            |....::||:.:||:||:|.|::||:.:.| :.||:|||.||.||:|.||::||||.:|..|:|.
Zfish    34 CRSVKEFEKINRIGEGTYGIVYRARDTRTN-EIVALKKVRMDKEKDGIPISSLREINLLIRLRHP 97

  Fly   109 NVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQQLLNGLYYIH 173
            |:|.|.|:      ....:..:.:||..:||.|||.||.||...||..::|.::.|||.||.|:|
Zfish    98 NIVELKEV------VVGSHLESLFLVMSYCEQDLASLLENMQSPFSEAQVKCIVLQLLKGLAYLH 156

  Fly   174 SNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRPPELLLGDRNY 238
            .|.|||||:|.:|:|:|..|.:|:|||||||.:.||...    .|.||||||||.||||||.:..
Zfish   157 HNFILHRDLKVSNLLMTDKGCVKIADFGLARVYGIPLQP----MTPRVVTLWYRAPELLLGTKTQ 217

  Fly   239 GPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELELYKSIELPKNQ 303
            ...:|||..|||.||:....|::.|.:|.|||..|.||.|:....:|||...|.|.....|.|..
Zfish   218 TTALDMWAVGCIFAELLAHKPLLPGASEIQQLDLIVQLLGTPNESIWPGFSRLPLVGQYSLRKQP 282

  Fly   304 KRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSKMLS----QHL 364
            ...:|.:..  ...:.|..||:.|...:|::|..|...|...:|...|:|.:...|.:    ::.
Zfish   283 YNNLKNKFT--WLSEAGLRLLNLLFMYNPQRRATAIDCLESSYFKEKPLPCEPELMPTFPHHRNK 345

  Fly   365 QSMFEYLAQPRRS 377
            :|..|...|.:||
Zfish   346 RSASETEHQTKRS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 126/302 (42%)
cdk10NP_001017622.2 STKc_CDK10 32..340 CDD:173742 130/318 (41%)

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