DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and cdk9

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_012823646.1 Gene:cdk9 / 448039 XenbaseID:XB-GENE-483721 Length:382 Species:Xenopus tropicalis


Alignment Length:390 Identity:274/390 - (70%)
Similarity:310/390 - (79%) Gaps:29/390 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALRE 98
            |..:..:||||||.:|||::||||||||||||||:.::..|| ||:|||||:|||||||||||||
 Frog     3 KNYDSVEFPYCDEVSKYERLAKIGQGTFGEVFKAKHRQTGKK-VALKKVLMENEKEGFPITALRE 66

  Fly    99 IRILQLLKHENVVNLIEICRTK----------ATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKF 153
            |:||||||||||||||||||||          |...|..:.|.:||||||||||||||||.:|||
 Frog    67 IKILQLLKHENVVNLIEICRTKNSLAHLVSPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKF 131

  Fly   154 SLGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYT 218
            :|.|||||||.|||||||||.||||||||||||||||:.|:|||||||||||||:.||...|:||
 Frog   132 TLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYT 196

  Fly   219 NRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPD 283
            ||||||||||||||||:|:||||:|:|||||||||||||||||||||||.|||.|||||||.||:
 Frog   197 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 261

  Fly   284 VWPGVEELELYKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFW 348
            |||.|::.|||:.:||||.|||:|||||:.||||....||:||||.|||.:|||:|.||||||||
 Frog   262 VWPNVDKYELYQKLELPKGQKRKVKERLKAYVKDLYALDLIDKLLVLDPAQRIDSDDALNHDFFW 326

  Fly   349 TDPMPSDLSKMLSQHLQSMFEYLAQPRR---------SNQMRNYHQQLTTMNQKPQDNSMIDRVW 404
            :|||||||..|||.|.||||||||.|||         :||.||    ....||     |..|||:
 Frog   327 SDPMPSDLKNMLSTHNQSMFEYLAPPRRRGGHMPQQPANQARN----PAATNQ-----SEFDRVF 382

  Fly   405  404
             Frog   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 238/319 (75%)
cdk9XP_012823646.1 STKc_CDK9 6..325 CDD:270848 238/319 (75%)
S_TKc 19..325 CDD:214567 231/306 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 479 1.000 Domainoid score I420
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55566
Inparanoid 1 1.050 547 1.000 Inparanoid score I1131
OMA 1 1.010 - - QHG48642
OrthoDB 1 1.010 - - D344403at33208
OrthoFinder 1 1.000 - - FOG0000444
OrthoInspector 1 1.000 - - oto103951
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R186
SonicParanoid 1 1.000 - - X3758
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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