DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk9 and Cdk8

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster


Alignment Length:421 Identity:129/421 - (30%)
Similarity:196/421 - (46%) Gaps:81/421 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DYDFPYCD--ESNKYEKV-----AKIGQGTFGEVFKAREKK-GNKKFVAMKKVLMDNEKEGFPIT 94
            ||||....  |..|.|.:     .|:|:||:|.|:||:.|: .:.|..|:|::    :..|..::
  Fly     2 DYDFKMKTQIERTKVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMS 62

  Fly    95 ALREIRILQLLKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDL--------AGLLSNMNV 151
            |.|||.:|:.|||:||:.||.:     ..::..|..|.|: |:.||||        |...:...|
  Fly    63 ACREIALLRELKHQNVITLIRV-----FLSHNDRKVFLLI-DYAEHDLWHIIKFHRAAKATKKQV 121

  Fly   152 KFSLGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLI----TKHGILKLADFGLARAFSIPKNE 212
            ....|.:|.::.|:|:|::|:|||.:||||:|.||:|:    .:.|.:|:||.|.||.|:.|...
  Fly   122 VVPRGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKP 186

  Fly   213 SKNRYTNRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTE---------QQ 268
            ..: ....|||.|||.||||||.|:|...:|:|..|||.||:.|..||.....|         ..
  Fly   187 LAD-LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 250

  Fly   269 QLTFISQLCGSFTPDVWPGVEEL------------ELYKSIELPKNQKRRVKERLRPYVKDQTGC 321
            ||..|..:.|......|..::::            ..|.:..|.|..:|   .:::|   |....
  Fly   251 QLDRIFNVMGFPQDKDWEDIKKMPEHHTLTKDFKRSTYSTCSLAKYMER---HKIKP---DSKAF 309

  Fly   322 DLLDKLLTLDPKKRIDADTALNHDFFWTDPMPS-----------------------DLSKMLSQH 363
            .||.|||.:||.|||.::.|:...:|..:|.|:                       |.|....|.
  Fly   310 HLLQKLLLMDPNKRITSEQAMQDQYFQEEPQPTQDVFAGCPIPYPKREFLTDDDQEDKSDNKRQQ 374

  Fly   364 LQSMFEYLAQPRRSNQMRNYHQQLTTMNQKP 394
            .|...:...|.::..|.:...||...||.:|
  Fly   375 QQQQQQQQQQQQQQQQQQQQQQQQQQMNAEP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 115/349 (33%)
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 108/332 (33%)
S_TKc 22..335 CDD:214567 108/329 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442410
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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