DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk9 and Cdk9

DIOPT Version :9

Sequence 1:NP_477226.2 Gene:Cdk9 / 37586 FlyBaseID:FBgn0019949 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001007744.1 Gene:Cdk9 / 362110 RGDID:1359638 Length:372 Species:Rattus norvegicus


Alignment Length:364 Identity:262/364 - (71%)
Similarity:302/364 - (82%) Gaps:6/364 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KYIEDYDFPYCDESNKYEKVAKIGQGTFGEVFKAREKKGNKKFVAMKKVLMDNEKEGFPITALRE 98
            |..:..:.|:|||..||||:||||||||||||||:.::..:| ||:|||||:|||||||||||||
  Rat     3 KQYDSVECPFCDEVTKYEKLAKIGQGTFGEVFKAKHRQTGQK-VALKKVLMENEKEGFPITALRE 66

  Fly    99 IRILQLLKHENVVNLIEICRTKATATNGYRSTFYLVFDFCEHDLAGLLSNMNVKFSLGEIKKVMQ 163
            |:|||||||||||||||||||||:..|..:.:.|||||||||||||||||:.|||:|.|||:|||
  Rat    67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 131

  Fly   164 QLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFSIPKNESKNRYTNRVVTLWYRP 228
            .|||||||||.||||||||||||||||:.|:|||||||||||||:.||...||||||||||||||
  Rat   132 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 196

  Fly   229 PELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGNTEQQQLTFISQLCGSFTPDVWPGVEELEL 293
            ||||||:|:||||:|:|||||||||||||||||||||||.||..|||||||.||:|||.|::.||
  Rat   197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDKYEL 261

  Fly   294 YKSIELPKNQKRRVKERLRPYVKDQTGCDLLDKLLTLDPKKRIDADTALNHDFFWTDPMPSDLSK 358
            ::.:||.|.|||:||:||:.||:|....||:||||.|||.:|||:|.||||||||:|||||||..
  Rat   262 FEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKG 326

  Fly   359 MLSQHLQSMFEYLAQPRR-----SNQMRNYHQQLTTMNQ 392
            |||.||.|||||||.|||     :.|..|..:...|.||
  Rat   327 MLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNPATTNQ 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk9NP_477226.2 STKc_CDK9 37..347 CDD:270848 231/309 (75%)
Cdk9NP_001007744.1 STKc_CDK9 6..315 CDD:270848 230/308 (75%)
T-loop. /evidence=ECO:0000250 166..191 19/24 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..372 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353433
Domainoid 1 1.000 474 1.000 Domainoid score I418
eggNOG 1 0.900 - - E1_KOG0669
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55566
Inparanoid 1 1.050 537 1.000 Inparanoid score I1150
OMA 1 1.010 - - QHG48642
OrthoDB 1 1.010 - - D344403at33208
OrthoFinder 1 1.000 - - FOG0000444
OrthoInspector 1 1.000 - - oto97271
orthoMCL 1 0.900 - - OOG6_104394
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3758
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.