DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and AT4G02940

DIOPT Version :10

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_192203.1 Gene:AT4G02940 / 828132 AraportID:AT4G02940 Length:569 Species:Arabidopsis thaliana


Alignment Length:234 Identity:56/234 - (23%)
Similarity:94/234 - (40%) Gaps:77/234 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RGLHIIADFVTEEEESTL------LRAIGEDGRTSEVTGSLKHRNVKH------------FGF-- 179
            :||.:..:.:.|:|.|.|      ||..|.:|:.:..:..|.::.:|.            ||.  
plant   240 KGLKLYEELLKEDEISKLLDFVAELREAGINGKLAGESFILFNKQIKGNKRELIQLGVPIFGHVK 304

  Fly   180 --EFLYGTN---NVDPSKPLEQSIPSACDILWPRLNSFASTW----DWSSPDQLTVNEYEPGHGI 235
              |....||   |::|..||.:|:          ::.|. ||    ::..|:...:|.:|.|...
plant   305 ADENSNDTNNSVNIEPIPPLLESV----------IDHFV-TWRLIPEYKRPNGCVINFFEEGEYS 358

  Fly   236 -----PPHVDTHSAFLDPILSLSLQSDVVMDFRR---GDDQVQVR------LPRRSLLIMSGEAR 286
                 |||::      .||.:|.| |:..|.:.|   .|::...|      |.:.|||:|.|.:.
plant   359 QPFLKPPHLE------QPISTLVL-SESTMAYGRILSSDNEGNFRGPLTLSLKQGSLLVMRGNSA 416

  Fly   287 YDWTHGIRPKHIDVVPSASGGLTTQARGKRTSLTFRRLR 325
            ....|.:.|                ::.||.|:||.|:|
plant   417 DMARHVMCP----------------SQNKRVSITFFRIR 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:409865
2OG-FeII_Oxy 136..322 CDD:473886 53/228 (23%)
UbiE 368..498 CDD:441828
AT4G02940NP_192203.1 2OG-FeII_Oxy <314..435 CDD:473886 35/154 (23%)
Blue background indicates that the domain is not in the aligned region.

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