DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and AT2G17970

DIOPT Version :10

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_179387.1 Gene:AT2G17970 / 816307 AraportID:AT2G17970 Length:507 Species:Arabidopsis thaliana


Alignment Length:214 Identity:52/214 - (24%)
Similarity:79/214 - (36%) Gaps:60/214 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 IADFVTEEEESTLLRAIGEDGRTSEVTGSLKH-------RNVKHFGFEFLYGTN----------- 186
            |.|.|.:.:|.      |..|...:.|.:..|       |....||..:.|..:           
plant   231 IVDQVYQLQEK------GRRGELKKRTFTAPHKWMRGKGRETIQFGCCYNYAPDRAGNPPGILQR 289

  Fly   187 -NVDPSKPLEQSIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVDTHSAFLDPIL 250
             .|||       :|....::..:|..:........||...||.|:.|..||||:|.|. ||.|..
plant   290 EEVDP-------LPHLFKVIIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHD-FLRPFC 346

  Fly   251 SLSLQSDVVMDFRR-------GD--DQVQVRLPRRSLLIMSGEARYDWTHGIRPKH-IDVVPSAS 305
            ::|..|:..:.|..       ||  ....:.||..|:|:::|..      ....|| :..||:  
plant   347 TISFLSECDILFGSNLKVEGPGDFSGSYSIPLPVGSVLVLNGNG------ADVAKHCVPAVPT-- 403

  Fly   306 GGLTTQARGKRTSLTFRRL 324
                     ||.|:|||::
plant   404 ---------KRISITFRKM 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:409865
2OG-FeII_Oxy 136..322 CDD:473886 50/210 (24%)
UbiE 368..498 CDD:441828
AT2G17970NP_179387.1 2OG-FeII_Oxy 215..411 CDD:473886 50/210 (24%)
Blue background indicates that the domain is not in the aligned region.

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