DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17807 and Gstcd

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001343238.1 Gene:Gstcd / 67553 MGIID:1914803 Length:634 Species:Mus musculus


Alignment Length:496 Identity:98/496 - (19%)
Similarity:149/496 - (30%) Gaps:207/496 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GLSNGLTEECLLTE-AAATGGKVIQV---VMLPGKSYC----FFICASL-------EDSQLIYEG 98
            |:....|||.|..| :..|.|.:..:   |.|...|||    |.:|..|       .|:..:.|.
Mouse     3 GIKKSPTEESLYLEYSHQTEGCIFPLHTSVTLFLLSYCECKVFNVCLVLTEESTDTSDTSFLKEA 67

  Fly    99 MH---NISTIGQQ------------------------GAVAYLSYIRQ----------------- 119
            :.   .|..|.:|                        |....|.:|.|                 
Mouse    68 LPQDLEIQVISKQALPPIVQNCCLPAVVDQPDVFCRAGLAVVLRHIIQKSYEAEPSRKEILELLG 132

  Fly   120 -----LPALAGKSEWNK------PLPRGLHIIADFVTE---------EEESTLLRAIGEDGRTSE 164
                 |.|.|..|:|.:      ||     .:.:|:.|         ||...|.|.:.|..|...
Mouse   133 FKKTCLKACAEVSQWTRLCELTIPL-----AVENFLQESSEHPPTIPEEILELERKLSEPVRVHN 192

  Fly   165 VTGSLKHRNVKH---FGFEFLYGTNNVDPSKPLEQSIPSACDILWPRLNSFASTWDWSSP----- 221
             ...|:.:.:|.   .|.|...|.... .||...|..|.                |.::|     
Mouse   193 -DDKLRRQKLKQQKAAGSEPPSGKGKA-KSKASAQKTPK----------------DLAAPSKSLE 239

  Fly   222 -----DQLTVNE------YEPGH-------GIPP--HVDTHSAFL---DPILSLSLQSDVVMDFR 263
                 .:|||.|      .||.|       .:||  ||.....:.   |.:|...:...:|:..:
Mouse   240 LKVAFSKLTVQEDAAASNREPSHIRKAKAADLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIICK 304

  Fly   264 RGDDQVQVRLPRRSLLIMSGEARYDWTHGIR--PKHIDVVPSASG-------GLTTQAR------ 313
            :..:::: :.|    |:.|      |...|:  || :....|..|       .|...||      
Mouse   305 KFSEKLE-QFP----LLTS------WYQRIQEVPK-VKTAASKCGIYFLYLPELLNSARKQPVNS 357

  Fly   314 ----------------GKRTSLTFRRLRKG--------PCDC------SYPALCDTQQTKVPQEL 348
                            |.|.::| :.:.||        ||..      |.||....::.|:..: 
Mouse   358 DEVAAVDEQSDPLFIGGPRPTMT-KLMEKGIEAMFSPHPCPAWTLDWSSLPAAVSPKEGKMSTD- 420

  Fly   349 HASLAAQAITLEQQNVHEVY---------DKIADHFSETRH 380
                  :|:..:||..:.||         |:|.|..|...|
Mouse   421 ------RALRKQQQLNNLVYLVLNQAKPGDRIVDFCSGGGH 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877 24/111 (22%)
2OG-FeII_Oxy 136..322 CDD:304390 48/256 (19%)
Methyltransf_11 400..490 CDD:285453
GstcdNP_001343238.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..233 11/61 (18%)
GST_C_family <271..330 CDD:322082 14/70 (20%)
AdoMet_MTases 424..542 CDD:327401 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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