DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and LOC556054

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_003200481.1 Gene:LOC556054 / 556054 -ID:- Length:410 Species:Danio rerio


Alignment Length:254 Identity:46/254 - (18%)
Similarity:82/254 - (32%) Gaps:113/254 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 LCDTQQTKVPQELHA--SLAAQAITLEQ--QNVHEVYDKIADHFSETRHTPWP----------QV 386
            :.||:.|: .|.|.|  |.:.|...|.:  .:||:.  :...|.|...|||..          ::
Zfish    16 MADTESTE-QQPLSAAPSQSVQPSPLPKPVSSVHQT--QRPTHPSHAPHTPHSASLPSCPGRGKM 77

  Fly   387 SEFLDSFEPQS-----------------------------------------VVLDIGCGNGKYL 410
            ::||:..|..|                                         :|||:|.|.|   
Zfish    78 AKFLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHIFKDKIVLDVGSGTG--- 139

  Fly   411 SCNPLLLSVGCDRAQGLLAVGRRKGQNVFRCDCLVVP------VRSSSIDGCISIAVIHHLATKE 469
                 :||:...:|         ..::|:..:|..:.      ::::.:|   |:..|.....:|
Zfish   140 -----ILSMFAAKA---------GAKHVYGIECSSISEYSEKIIKANHLD---SVITIFKGKVEE 187

  Fly   470 RRL------------------------AALQEMARVLRPGG-----RALVYVWAKDQRK 499
            ..|                        ..:....:.|:|||     ||.:||.|.:.|:
Zfish   188 TELPVDQVDIIISEWMGYCLFYESMLNTVIYARDKWLKPGGLMFPDRAALYVVAIEDRQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877
2OG-FeII_Oxy 136..322 CDD:304390
Methyltransf_11 400..490 CDD:285453 21/124 (17%)
LOC556054XP_003200481.1 AdoMet_MTases 131..231 CDD:100107 20/119 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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