DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and prmt3

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001017655.1 Gene:prmt3 / 550348 ZFINID:ZDB-GENE-041105-1 Length:512 Species:Danio rerio


Alignment Length:223 Identity:46/223 - (20%)
Similarity:81/223 - (36%) Gaps:67/223 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 SLLIMS-GEARYDWTHGIRPK-------HIDV--VPSASGGLTTQARGKRTSLTFRRLRKGPCDC 331
            |||:.| |...:|....::|.       .|||  :..||||:.:.:...:.::..|..|      
Zfish    94 SLLLASDGPLPWDGDEYMKPALQDDPLLQIDVEELREASGGMGSSSAADQVNVEDRVQR------ 152

  Fly   332 SYPALCDTQQTKVPQELH-ASLAAQAITLEQQNVH----------------EVYDKIADHFS--- 376
                 .:....:..|::| ..|.||.:.|.....|                |.|.....|:|   
Zfish   153 -----AEEALARAMQDMHKLKLLAQGLVLNADTSHGPTCSGAIAELREDEDEAYFSSYGHYSIHE 212

  Fly   377 ----------ETRHTPWPQVSEFLDSFEPQSVVLDIGCGNGKYLSCNPLLLSVGCDRAQGLLAVG 431
                      ..|...:..:..|.|     .||||:|||.|        :||:...:|.....|.
Zfish   213 EMLKDKVRTESYRDFMYRNMDVFKD-----KVVLDVGCGTG--------ILSMFAAKAGAKKVVA 264

  Fly   432 RRKGQNVFRCDCLVVPVRSSSIDGCISI 459
            ..:.:.:::...:   |||::::..|::
Zfish   265 VDQSEIIYQAMDI---VRSNNLEDTITL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877
2OG-FeII_Oxy 136..322 CDD:304390 14/54 (26%)
Methyltransf_11 400..490 CDD:285453 14/60 (23%)
prmt3NP_001017655.1 zf-C2H2_2 39..>86 CDD:289522
Methyltransf_18 236..340 CDD:289607 17/70 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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