DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and Alkbh1

DIOPT Version :10

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001382540.1 Gene:Alkbh1 / 362766 RGDID:1308327 Length:389 Species:Rattus norvegicus


Alignment Length:168 Identity:36/168 - (21%)
Similarity:59/168 - (35%) Gaps:55/168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VNEYEPGHGIPPHVD----THSAFLDPILSLSL-QSDVVM--DFRRGDDQVQVRLPRRSLLIMSG 283
            :|.|.....:..|||    .||   .|:||.|. ||.:.:  ..:|.:....:.:....:::|||
  Rat   219 LNYYRLDSTLGIHVDRSELDHS---KPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSGDIMVMSG 280

  Fly   284 EARYDWTHGIRPK---HID--------------VVPSASGGL------------TTQARGKRTSL 319
            .:|. ..|.: |:   |.|              |:|  ||.|            .|..:..|.::
  Rat   281 FSRL-LNHAV-PRVLPHPDGECLPHCLETPLPAVLP--SGSLLEPCSVEDWQVCATYLKTARVNM 341

  Fly   320 TFRR------------LRKGPCDCSYPALCDTQQTKVP 345
            |.|:            :.:...|.:...||.....|.|
  Rat   342 TVRQVLATGQDFPLEPMEEPKRDITADGLCHLHDQKSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:409865
2OG-FeII_Oxy 136..322 CDD:473886 30/131 (23%)
UbiE 368..498 CDD:441828
Alkbh1NP_001382540.1 2OG-FeII_Oxy 119..289 CDD:473886 19/73 (26%)
Blue background indicates that the domain is not in the aligned region.

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