DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and Alkbh1

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001382540.1 Gene:Alkbh1 / 362766 RGDID:1308327 Length:389 Species:Rattus norvegicus


Alignment Length:168 Identity:36/168 - (21%)
Similarity:59/168 - (35%) Gaps:55/168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VNEYEPGHGIPPHVD----THSAFLDPILSLSL-QSDVVM--DFRRGDDQVQVRLPRRSLLIMSG 283
            :|.|.....:..|||    .||   .|:||.|. ||.:.:  ..:|.:....:.:....:::|||
  Rat   219 LNYYRLDSTLGIHVDRSELDHS---KPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSGDIMVMSG 280

  Fly   284 EARYDWTHGIRPK---HID--------------VVPSASGGL------------TTQARGKRTSL 319
            .:|. ..|.: |:   |.|              |:|  ||.|            .|..:..|.::
  Rat   281 FSRL-LNHAV-PRVLPHPDGECLPHCLETPLPAVLP--SGSLLEPCSVEDWQVCATYLKTARVNM 341

  Fly   320 TFRR------------LRKGPCDCSYPALCDTQQTKVP 345
            |.|:            :.:...|.:...||.....|.|
  Rat   342 TVRQVLATGQDFPLEPMEEPKRDITADGLCHLHDQKSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877
2OG-FeII_Oxy 136..322 CDD:304390 30/131 (23%)
Methyltransf_11 400..490 CDD:285453
Alkbh1NP_001382540.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3145
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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