DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and prmt1

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_956944.2 Gene:prmt1 / 321974 ZFINID:ZDB-GENE-030131-693 Length:348 Species:Danio rerio


Alignment Length:249 Identity:49/249 - (19%)
Similarity:74/249 - (29%) Gaps:124/249 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VLNVGLSNGLTEECLLTEAAATGGKVI-----------------------QVVMLPGK------- 79
            ||:||...|:.  |:.  ||..|.|.:                       .|.::.||       
Zfish    69 VLDVGSGTGIL--CMF--AAKAGAKKVIGIECSSISDYAVKIVKANKLDHIVTIIKGKVEEVELP 129

  Fly    80 ------------SYCFFICASLEDSQLIYEGMHNISTIGQQGAVAYLSYIRQLPALAGKSEWNKP 132
                        .||.|           ||.|.|        .|.|           .:.:|.||
Zfish   130 VENVDIIISEWMGYCLF-----------YESMLN--------TVIY-----------ARDKWLKP 164

  Fly   133 LPRGLHIIADFVTEEEESTLLRAIGEDGRTSEVTGSLKHRNVKHFGFEFLYG------------- 184
                     |.:...:.:||.....||         .::::.|...:|.:||             
Zfish   165 ---------DGLIFPDRATLYVTAIED---------RQYKDYKIHWWENVYGFDMSCIKEVAITE 211

  Fly   185 --TNNVDPSKPLEQSIPSAC-----DILWPRLNSFASTWDWSSPDQLTV--NEY 229
              .:.|||    :|.:.:||     ||...::...:.|    ||..|.|  |:|
Zfish   212 PLVDVVDP----KQLVSTACLIKEVDIYTVKIEDLSFT----SPFCLQVKRNDY 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877 22/115 (19%)
2OG-FeII_Oxy 136..322 CDD:304390 24/116 (21%)
Methyltransf_11 400..490 CDD:285453
prmt1NP_956944.2 Methyltransf_18 65..169 CDD:289607 26/142 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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