DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17807 and Alkbh5

DIOPT Version :10

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001178572.1 Gene:Alkbh5 / 303193 RGDID:1309496 Length:395 Species:Rattus norvegicus


Alignment Length:206 Identity:51/206 - (24%)
Similarity:81/206 - (39%) Gaps:49/206 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 VNEYEPGHGIPPHVDTHSAFLDPILSLSLQSDVVMDF---------RRGDDQVQVRLPRRSLLIM 281
            :|:|:||..|..|||....|..||:|:|..||..:.|         |..:..:.:.:.|.|:.::
  Rat   193 INDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVL 257

  Fly   282 SGEARYDWTHGIRPKHIDVVPSASGGLTTQARGKRTSLTFRRLRKGPCDCSYPALCDTQQTK--V 344
            ||.|..:.||.|||:.|              :.:|..:..|:.|     ...|.|    :||  .
  Rat   258 SGYAADEITHCIRPQDI--------------KERRAVIILRKTR-----LDAPRL----ETKSLS 299

  Fly   345 PQELHASLAAQAIT-------LEQQNVHEVYDKIADHFSETRHTPWPQVSEFLDSFEPQSVVLDI 402
            ...|..|.|:..::       |:.:..|...|..|.|        .|::.|.......:||:|..
  Rat   300 SSTLPPSYASDRLSGNTRDPALKPKRSHRKADPDAAH--------RPRILEMDKEENRRSVLLPT 356

  Fly   403 GCGNGKYLSCN 413
            ....|.:.|.|
  Rat   357 HRRRGSFSSEN 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:409865
2OG-FeII_Oxy 136..322 CDD:473886 29/104 (28%)
UbiE 368..498 CDD:441828 11/46 (24%)
Alkbh5NP_001178572.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..83
2OG-FeII_Oxy <137..271 CDD:473886 25/77 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..395 18/82 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.