DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and AlkB

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001334682.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster


Alignment Length:252 Identity:48/252 - (19%)
Similarity:91/252 - (36%) Gaps:66/252 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 STIGQQGAVAYLSYIRQLPALAGKSEW------NKPLPRGLHIIAD-FVTEEEESTLLRAIGEDG 160
            :.|.|:.:::.:..::.:|.:....:|      |.|   |:.:|.: |..........|.:.:..
  Fly    39 NNIVQRLSISNVESLQTMPGVKSPKDWRTYTLTNHP---GIIVIRNPFSERGRRYWSARCLRDFP 100

  Fly   161 RTSEV-----------------------TGSLKHRNVKH------FGFEFLYGTNNVDP--SKPL 194
            ||..:                       :..::.:.:|.      ||:...:.|...|.  ..|.
  Fly   101 RTPNIVNLNERLFDESVRSDWWKQLNLCSDGVEFQRIKSAMRWTTFGYHHNWDTKIYDEEMQSPF 165

  Fly   195 EQSIPSACDILWPRLNSFASTWDWS--SPDQLTVNEYEPGHGIPPHVD----THSAFLDPILSLS 253
            .:.:.|.|.:       ||....::  .|:...||.|..|..:..|.|    ..||   |:.|.|
  Fly   166 PEDLSSLCGL-------FAQALGYADFKPEAAIVNYYPVGSTLSGHTDHSEPNKSA---PLFSFS 220

  Fly   254 LQSDVVMDFRRGDDQVQ-----VRLPRRSLLIMSGEARYDWTHGIRPKHIDVVPSAS 305
            .....:  |..|...::     :.|....::|||||:|..: |.: |:.|....||:
  Fly   221 FGQTAI--FLIGGRSLEEKPTAIYLQSGDVMIMSGESRLCY-HAV-PRIIKTQASAT 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877 2/15 (13%)
2OG-FeII_Oxy 136..322 CDD:304390 42/213 (20%)
Methyltransf_11 400..490 CDD:285453
AlkBNP_001334682.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3145
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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