DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and R08F11.4

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_504052.1 Gene:R08F11.4 / 178797 WormBaseID:WBGene00019968 Length:354 Species:Caenorhabditis elegans


Alignment Length:203 Identity:44/203 - (21%)
Similarity:69/203 - (33%) Gaps:52/203 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 RKGPCDCSYPALCDTQQ-----TKVPQELHASLAAQAITLEQQNVHEVYDKIADHFSETRHTPWP 384
            ::||....|.|..|.::     ||:..|.|.             :.::...|.:...|       
 Worm   116 KEGPYGLDYSAYSDFEEMQQKFTKIVHEKHI-------------IPDLVPAIGNGIKE------- 160

  Fly   385 QVSEFLDSFEPQSV-VLDIGCGNGKYLSC----NPLLLSVGCDRAQGLLAVGRRKGQN------- 437
                   ..|...: |||:|||.|.:...    .|....||.|..:..:...|.|.::       
 Worm   161 -------KLEAGGIRVLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAARLKKKSDGTDFEN 218

  Fly   438 --VFRCDCLVVPVRSSSIDGCISIAVIHHLATKERRLAALQEMARVLRPGGRALVYVWAKDQRKN 500
              ....|..::|  ||..|....:.:......:.|....|.|:.||::|.|  ||.|...|...|
 Worm   219 LEFVVADAAIMP--SSWTDSFDLVILFGSCHDQMRPDLCLLEVHRVVKPDG--LVAVTDVDGSSN 279

  Fly   501 --DKKSTY 506
              ..:.||
 Worm   280 VFTDRETY 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877
2OG-FeII_Oxy 136..322 CDD:304390
Methyltransf_11 400..490 CDD:285453 24/102 (24%)
R08F11.4NP_504052.1 Methyltransf_31 165..>281 CDD:316372 30/119 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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