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Protein Alignment CG17807 and R08E5.3

DIOPT Version :9

Sequence 1:	NP_611690.2	Gene:	CG17807 / 37585	FlyBaseID:	FBgn0034748	Length:	615	Species:	Drosophila melanogaster
Sequence 2:	NP_504045.1	Gene:	R08E5.3 / 178795	WormBaseID:	WBGene00019963	Length:	365	Species:	Caenorhabditis elegans

Alignment Length:	211	Identity:	50/211 - (23%)
Similarity:	74/211 - (35%)	Gaps:	69/211 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly   321 FRRLRKGPCDCSYPALCDTQQTK-------VPQELHASLAAQAITLEQQNVHEVYDKIADHFSET 378
            ||  :.||....|     .|.||       :.|.||..             |.|.|.:
Worm   124 FR--KDGPLGLEY-----AQFTKFQYFMGTMSQALHEK-------------HVVADML------- 161

  Fly   379 RHTPWPQVSE-FLDSFEPQSV-VLDIGCGNGKYLSCNPLLLS--------VGCDRAQGLLAVGRR 433
                 |.:.. .::..|...| |||:|||.|.:.|    ||:        ||.|..:..:...::
Worm   162 -----PDIGNGVVEKLEAGGVRVLDVGCGGGFHSS----LLAEQYPKSHFVGLDIGEDAIRQAKQ 217

  Fly   434 K---------GQNVFRCDCLVVP-VRSSSIDGCISIAVIHHLATKERRL-AALQEMARVLRPGGR 487
            :         ......||...:| :.:.|.|    :.:|......:||. ..:||:.|||:|.|.
Worm   218 RKTKSGAAFNNLEFIECDAGKMPEIWTDSFD----LVLIFDACHDQRRPDLCVQEIHRVLKPSGM 278

  Fly   488 -ALVYVWAKDQRKNDK 502
             |:|.|........||
Worm   279 FAMVEVLGSSNVYTDK 294

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.