DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17807 and strm-1

DIOPT Version :9

Sequence 1:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_497549.2 Gene:strm-1 / 175358 WormBaseID:WBGene00019198 Length:334 Species:Caenorhabditis elegans


Alignment Length:268 Identity:55/268 - (20%)
Similarity:94/268 - (35%) Gaps:85/268 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 EQQNVHEVYDKIADHFSETRHTPWPQVSEFLD------------SFEPQSV-------------- 398
            |...::|...:..||...|.|. :..:|..:|            .||.|.:              
 Worm    27 EHDTLYEKALETGDHLEVTSHY-YSVMSTVIDEYFGGNFHFVPPKFEGQKLEEALKSLHCHIAEK 90

  Fly   399 --------VLDIGCGNGKYLSCNPLLLSV--------GCDRAQGLLAVGRRKGQNV---FRC--- 441
                    .||||||.|      .::|.:        |...|.....:|..|..|:   .||   
 Worm    91 LELSENVHCLDIGCGIG------GVMLDIADFGAKLTGVTIAPNEAEIGNEKFANMGISDRCKIV 149

  Fly   442 --DCLVVPVRSSSIDGCISIAVIHHLATKERRLAALQEMARVLRPGGRALVYVWAKDQRKNDKKS 504
              ||..:|...|:.|...:|..:.::...::   .::|:.|||:|||:.:||...|         
 Worm   150 AADCQKMPFEDSTFDVAYAIYSLKYIPNLDK---VMKEIQRVLKPGGKFIVYDLIK--------- 202

  Fly   505 TYLRQNKAVNKERTTEQQQRQKQHQELEQQLSNNNPLP-VHT-NRTEFQQQDVLVPWKTKDEQKT 567
                         |.:..:..|:|.:....|.....:| :|| :..|...:...:|...::..:.
 Worm   203 -------------TNDYDKDNKEHYKTLHHLEYACGMPSLHTQSEVEAAAEKWEMPVVERENLEE 254

  Fly   568 TY-LRYYH 574
            || .|.:|
 Worm   255 TYGNRAFH 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:240877
2OG-FeII_Oxy 136..322 CDD:304390
Methyltransf_11 400..490 CDD:285453 28/105 (27%)
strm-1NP_497549.2 Methyltransf_11 100..197 CDD:285453 28/105 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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