DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33143 and col12a1a

DIOPT Version :10

Sequence 1:NP_001368934.1 Gene:CG33143 / 37583 FlyBaseID:FBgn0053143 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_068070789.1 Gene:col12a1a / 100149543 ZFINID:ZDB-GENE-090728-1 Length:3113 Species:Danio rerio


Alignment Length:305 Identity:71/305 - (23%)
Similarity:109/305 - (35%) Gaps:102/305 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TIPAT-PENITVTFLTPTAVRVSWQTQIDLKAH---PIEKYIVTYKPTDDRVVQD---VAGSSEA 74
            |:|.: |.|:.|...|.:.:.|.|:       |   |:.:|.:.|.||....:::   |.|:..:
Zfish  2021 TLPRSGPRNLRVYDPTTSTLSVGWE-------HAEGPVIQYRIGYAPTTGDPIEEFTTVPGNRNS 2078

  Fly    75 IVLDRLLPSTQYSLVVTAIWQ---GKKYRSRGQIKFKTLDL--PKNTSQQD---------FPPGI 125
            ::|..|.|.|.|::.|.||:|   |.:....|    |||||  |:|....|         :.|. 
Zfish  2079 VILQNLQPDTPYNINVEAIYQDGPGGRLSGDG----KTLDLLGPRNLRVSDEWYTRFRVSWDPA- 2138

  Fly   126 YGNSSNGARNV------TNNASIFGDDVTSTATNTLTHGTTRELPTIRGVEIGIVLIVLMVWAGA 184
             ....||.:.|      |:....|..||||...|.|..|||.:|......:.|:        :||
Zfish  2139 -AARVNGYKLVYTPVGTTDTMEAFVGDVTSHHLNNLQPGTTYDLKVYAQYDAGL--------SGA 2194

  Fly   185 I-----ALFFNRWGKIRMLLPYQPDYKHEQLKVPGTGVCSASGCNGQHSHQCLPRCEGCGIFDRC 244
            :     .|:.|    :..|..|...|.                                   ..|
Zfish  2195 LVGQGTTLYLN----VTDLTSYNVGYD-----------------------------------SFC 2220

  Fly   245 FQY-PRRELERDCGCQFALLHKADVESXQPAHREASSAAVSAASS 288
            .:: |.|.         |..::..|.. .|:||.|....::||.|
Zfish  2221 IRWTPHRA---------ATSYRLKVNPFNPSHRGAQEVTITAAES 2256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33143NP_001368934.1 FN3 19..93 CDD:238020 21/80 (26%)
DUF4808 165..>230 CDD:374343 8/69 (12%)
DUF4808 <534..597 CDD:374343
col12a1aXP_068070789.1 fn3 26..103 CDD:394996
vWA_collagen_alphaI-XII-like 134..297 CDD:238759
fn3 331..404 CDD:394996
vWA_collagen_alphaI-XII-like 434..597 CDD:238759
FN3 629..716 CDD:238020
FN3 721..807 CDD:238020
fn3 812..890 CDD:394996
fn3 902..981 CDD:394996
FN3 995..1069 CDD:238020
fn3 1084..1163 CDD:394996
vWA_collagen_alphaI-XII-like 1195..1358 CDD:238759
fn3 1387..1464 CDD:394996
fn3 1475..1556 CDD:394996
FN3 1565..1643 CDD:214495
fn3 1656..1728 CDD:394996
FN3 <1702..2093 CDD:442628 21/78 (27%)
FN3 2118..2192 CDD:238020 20/83 (24%)
fn3 2206..2283 CDD:394996 15/95 (16%)
vWA_collagen_alphaI-XII-like 2323..2487 CDD:238759
TSPN 2521..2715 CDD:214560
gly_rich_SclB <2769..>2995 CDD:468478
Blue background indicates that the domain is not in the aligned region.

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