DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4329 and eml5

DIOPT Version :9

Sequence 1:NP_611687.1 Gene:CG4329 / 37582 FlyBaseID:FBgn0034745 Length:1171 Species:Drosophila melanogaster
Sequence 2:XP_009291519.1 Gene:eml5 / 570011 ZFINID:ZDB-GENE-030131-1677 Length:1982 Species:Danio rerio


Alignment Length:760 Identity:155/760 - (20%)
Similarity:278/760 - (36%) Gaps:160/760 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KRASLSNSTVTIRPRLIYGLRS-DVIGNIHFNLTKEVIYPVEGVLAFHDYVQNKQRFLRLPEDTR 73
            :||..|.    :|...|:|.|. |...|:.:..|.|::|.|..|...::..||.|||....:|  
Zfish   678 ERAPASG----MRLHFIHGYRGYDCRSNLFYTQTGEIVYHVAAVGVVYNRQQNTQRFYLGHDD-- 736

  Fly    74 PEVISISSH--RKLLAV--VERHSKNGRYISIYELATLKKRRHLELPSNHRNAEIQQMIFTNDSR 134
             :::.::.|  :..:|.  |.|.|.    |.|:|...||.   |.:........:..:.|:.|.:
Zfish   737 -DILCLAIHPVKDYVATGQVGRDSS----IHIWETEFLKP---LSVLKGFHQFGVCALDFSADGK 793

  Fly   135 SVALITRPPEETLIMLVLDKTSTVIEGRATIPGSHGGAECIAGNPNDCNFMAVGGERTLLLMSKS 199
            .:|.:......|:::....|.    |..:||.||......|..||...:.:...|.:.:....::
Zfish   794 RLASVGLDDNHTIVLWEWRKG----EKLSTIRGSKDKIFVIKINPYMPDKLISAGVKHMKFWHRA 854

  Fly   200 ERGFSISNNLKVKYRVTSMAFLSLDLLMIGTSDDQLILVENGEQKLAQKASDADTVDLMIDQEVF 264
            ..|......                  .:|.::..:..|....:::.  .|...|.|:.|.:::|
Zfish   855 GGGLIGKKG------------------SMGKTETMMCAVYGWTEEMV--FSGTCTGDICIWRDMF 899

  Fly   265 DRDKELQEQRFLPTQAVSLPDRRVLCMTAFPKGFAY-----IIFNRAFVFERVSKFKFERKTILT 324
                        ..:.|...|..|..|.|..|||..     |:......|||..|....::.:|.
Zfish   900 ------------LVKTVKAHDGPVFSMHALEKGFVTGGKDGIVALWDDTFERCLKTYAIKRAVLA 952

  Fly   325 VPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVG-----ILIVPETLKTKQLKFEPLGVLIH 384
            ..:.          .|.::.......::..|..|.||     ||.|.        |..|:.:|:.
Zfish   953 PGSK----------GLLLEDNPSIRAISLGHGHILVGTKNGEILEVD--------KNGPITLLVQ 999

  Fly   385 ---TGEIIAMSVCAWKPIIMTASRDQTIRIWNYETALVEL-VRKFQVDVNIVELSLTGQMAAIGF 445
               .||:..::.....|:..|.|.|:|:|||:...:...| |||.:........|..|:..|:|.
Zfish  1000 GHMEGEVWGLATHPHLPLCATVSDDKTLRIWDLSPSHCMLAVRKLKKGGRCCCFSPDGKALAVGL 1064

  Fly   446 SDQ--LRITQIFMDDLNIVKTYNFPH----CNAVRYS--NFGHMMAAAYDNNIAITSVYKLDVLI 502
            :|.  |.:....::||     .:|.|    .:.:|:|  ...::..|:.|:.:.|.:|.....:.
Zfish  1065 NDGSFLIVNADTLEDL-----VSFHHRKDIISEIRFSPVTGKYLAVASGDSFVDIYNVMSSKRVG 1124

  Fly   503 NLKGHNGIVLSVAWSRTDKFLISGGAEGAIYLWDIETGARLQEIVQ--KG-------TEYVTISC 558
            ..||....:..:.|.:..|.|            .:.|.|:.|...:  :|       ||...|..
Zfish  1125 VCKGSMNYITHLDWDKRGKLL------------QVNTSAKEQLFFEAPRGKKQSIPVTEVEKIDW 1177

  Fly   559 STNDPLTIYAGTSIGTIREFQDSTLMREITIPSRTKGSVSDVCLARSDLIMFVADHEGNLFNMQL 623
            ||   .|...|:|...|     ..::.|:|       .|:..||:....::...|..|.:...:.
Zfish  1178 ST---WTCVLGSSCEGI-----WPVVSEVT-------EVTAACLSYDKKLLATGDDLGYVKLFKY 1227

  Fly   624 PFLEAGGGTFTNFRFF---DGPVNKLRFSYDGTLLFAISNKGT-LAIW-----------AMDNIE 673
            |.    .|.:..|:.:   ...|..:|:|:|.:||.::....| |.||           ..|:.|
Zfish  1228 PV----KGKYAKFKRYMAHSTHVTNVRWSHDDSLLASVGGSDTCLMIWNHETESCREARQCDSEE 1288

  Fly   674 GKVPY-----MDQDLMRSQEVLIPRSQLNDKIEQIANLELRLKQQ 713
            ..:..     .|.|:.|..|::.....|:..:..:..::..|:|:
Zfish  1289 SDIESEDDGGYDSDVTRENEIVYVIKALSTNMRPMTGVKPHLQQK 1333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4329NP_611687.1 WD40 repeat 124..167 CDD:293791 8/42 (19%)
WD40 repeat 173..211 CDD:293791 5/37 (14%)
WD40 repeat 215..248 CDD:293791 2/32 (6%)
WD40 repeat 288..324 CDD:293791 11/40 (28%)
WD40 <328..667 CDD:225201 77/368 (21%)
WD40 repeat 338..383 CDD:293791 10/49 (20%)
WD40 384..668 CDD:295369 68/319 (21%)
WD40 repeat 388..426 CDD:293791 12/38 (32%)
WD40 repeat 430..466 CDD:293791 8/37 (22%)
WD40 repeat 470..505 CDD:293791 6/36 (17%)
WD40 repeat 511..548 CDD:293791 6/36 (17%)
WD40 repeat 554..576 CDD:293791 6/21 (29%)
WD40 repeat 597..634 CDD:293791 7/36 (19%)
WD40 repeat 643..669 CDD:293791 10/37 (27%)
Apolipoprotein 701..864 CDD:279749 2/13 (15%)
MSP1_C 784..>1011 CDD:284802
Ax_dynein_light <958..1026 CDD:287215
eml5XP_009291519.1 HELP <2..48 CDD:281450
WD40 59..361 CDD:295369
WD40 repeat 64..104 CDD:293791
WD40 repeat 110..148 CDD:293791
WD40 repeat 153..201 CDD:293791
WD40 repeat 203..233 CDD:293791
WD40 208..627 CDD:225201
WD40 repeat 240..279 CDD:293791
WD40 repeat 294..329 CDD:293791
WD40 repeat 336..360 CDD:293791
WD40 repeat 378..414 CDD:293791
WD40 repeat 419..458 CDD:293791
WD40 repeat 529..568 CDD:293791
HELP <674..722 CDD:281450 14/47 (30%)
WD40 728..1157 CDD:225201 100/509 (20%)
WD40 733..1071 CDD:238121 78/401 (19%)
WD40 repeat 738..777 CDD:293791 11/45 (24%)
WD40 repeat 783..822 CDD:293791 8/42 (19%)
WD40 repeat 827..905 CDD:293791 12/109 (11%)
WD40 900..1226 CDD:295369 80/375 (21%)
WD40 repeat 912..999 CDD:293791 22/104 (21%)
WD40 repeat 1006..1040 CDD:293791 8/33 (24%)
WD40 repeat 1048..1074 CDD:293791 6/25 (24%)
WD40 repeat 1090..1115 CDD:293791 4/24 (17%)
WD40 repeat 1134..1189 CDD:293791 15/69 (22%)
WD40 1201..1553 CDD:295369 27/137 (20%)
WD40 repeat 1201..1240 CDD:293791 8/42 (19%)
WD40 repeat 1246..1273 CDD:293791 10/26 (38%)
WD40 repeat 1343..1416 CDD:293791
HELP <1370..1414 CDD:281450
WD40 1420..1819 CDD:225201
WD40 repeat 1431..1480 CDD:293791
WD40 1481..1818 CDD:295369
WD40 repeat 1485..1527 CDD:293791
WD40 repeat 1548..1613 CDD:293791
WD40 repeat 1618..1662 CDD:293791
WD40 1669..>1977 CDD:225201
WD40 repeat 1670..1703 CDD:293791
WD40 1702..1976 CDD:295369
WD40 repeat 1710..1747 CDD:293791
WD40 repeat 1752..1788 CDD:293791
WD40 repeat 1793..1832 CDD:293791
WD40 repeat 1839..1898 CDD:293791
WD40 repeat 1905..1944 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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