Sequence 1: | NP_611687.1 | Gene: | CG4329 / 37582 | FlyBaseID: | FBgn0034745 | Length: | 1171 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094438.2 | Gene: | Cfap52 / 303233 | RGDID: | 1308151 | Length: | 620 | Species: | Rattus norvegicus |
Alignment Length: | 769 | Identity: | 135/769 - (17%) |
---|---|---|---|
Similarity: | 243/769 - (31%) | Gaps: | 320/769 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 KEVIYPVEGVLAFHDYVQNKQRFLRLPEDTRPEVISISSHRKLLAVVERHSKNGRYISIYELATL 107
Fly 108 KKRRHLELPSNHRNAEIQQMIFTNDSRSVALITRPPEETLIMLVLDKTSTVIEGRATIPGSHGGA 172
Fly 173 ECIAGNPNDCNFMAVGG--ERTLLLMSKSER---------GFSISNNLKVKY-RVTSMAFLS--- 222
Fly 223 -------LDL-------------------LMIGTSDDQL----------ILVENGEQKLAQKASD 251
Fly 252 ADTVDLMIDQEVFDRDKELQEQRFLPTQAVSLPDRRVLCM----TAFPKGFAYIIFNRAFVFERV 312
Fly 313 SKFKFERK-TILTVP-------TNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILIVPETL 369
Fly 370 KTKQLKFEPLGVLIHTGEIIAMSVCAWKPIIMTASRDQTIRIWNYETALVELVRKFQVDVNIVEL 434
Fly 435 SLTGQMAAIGFSDQLRITQIFMDDLNIVKTYNFPHCNAVRYSNFGHMMAAAYDNN---------- 489
Fly 490 ---IAITSVYKLDVLINLKGHNGIVLSVAWSRTDKFLISGGAEGAIYLWDIETGARLQEIVQKGT 551
Fly 552 EY-VTISC---STNDPLTIYAGTSIGTI---------------------------REFQ------ 579
Fly 580 ----------DSTLMREITIPSRTKGSVSDVCLARS---------DLIMFVADH-EGNLFNMQLP 624
Fly 625 FLEAGGGTFTNFRFFDGPVNKLRFSYDGTLLFAISNKGTLAIWAMDNIEGKVPY 678 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4329 | NP_611687.1 | WD40 repeat | 124..167 | CDD:293791 | 8/42 (19%) |
WD40 repeat | 173..211 | CDD:293791 | 11/48 (23%) | ||
WD40 repeat | 215..248 | CDD:293791 | 12/71 (17%) | ||
WD40 repeat | 288..324 | CDD:293791 | 6/40 (15%) | ||
WD40 | <328..667 | CDD:225201 | 72/408 (18%) | ||
WD40 repeat | 338..383 | CDD:293791 | 8/44 (18%) | ||
WD40 | 384..668 | CDD:295369 | 62/353 (18%) | ||
WD40 repeat | 388..426 | CDD:293791 | 7/37 (19%) | ||
WD40 repeat | 430..466 | CDD:293791 | 5/35 (14%) | ||
WD40 repeat | 470..505 | CDD:293791 | 6/47 (13%) | ||
WD40 repeat | 511..548 | CDD:293791 | 13/36 (36%) | ||
WD40 repeat | 554..576 | CDD:293791 | 7/51 (14%) | ||
WD40 repeat | 597..634 | CDD:293791 | 8/46 (17%) | ||
WD40 repeat | 643..669 | CDD:293791 | 5/25 (20%) | ||
Apolipoprotein | 701..864 | CDD:279749 | |||
MSP1_C | 784..>1011 | CDD:284802 | |||
Ax_dynein_light | <958..1026 | CDD:287215 | |||
Cfap52 | NP_001094438.2 | WD40 | 9..399 | CDD:225201 | 88/511 (17%) |
WD40 | 30..399 | CDD:295369 | 88/511 (17%) | ||
WD40 repeat | 67..108 | CDD:293791 | 10/64 (16%) | ||
WD40 repeat | 115..157 | CDD:293791 | 10/41 (24%) | ||
WD40 repeat | 162..199 | CDD:293791 | 6/36 (17%) | ||
WD40 repeat | 205..302 | CDD:293791 | 22/121 (18%) | ||
WD40 repeat | 253..307 | CDD:293791 | 7/53 (13%) | ||
WD40 | 277..617 | CDD:225201 | 77/449 (17%) | ||
WD40 | 346..615 | CDD:295369 | 62/357 (17%) | ||
WD40 repeat | 380..414 | CDD:293791 | 4/33 (12%) | ||
WD40 repeat | 421..459 | CDD:293791 | 12/39 (31%) | ||
WD40 repeat | 464..492 | CDD:293791 | 7/28 (25%) | ||
WD40 repeat | 500..541 | CDD:293791 | 6/42 (14%) | ||
WD40 repeat | 548..584 | CDD:293791 | 6/42 (14%) | ||
WD40 repeat | 590..616 | CDD:293791 | 5/32 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |