DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4329 and EML2

DIOPT Version :9

Sequence 1:NP_611687.1 Gene:CG4329 / 37582 FlyBaseID:FBgn0034745 Length:1171 Species:Drosophila melanogaster
Sequence 2:NP_001180197.1 Gene:EML2 / 24139 HGNCID:18035 Length:850 Species:Homo sapiens


Alignment Length:700 Identity:124/700 - (17%)
Similarity:233/700 - (33%) Gaps:171/700 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IYGLRS-DVIGNIHFNLTKEVIYPVEGVLAFHDYVQNKQR-FLRLPEDTR-----PEVISISSHR 83
            :||.|. |...|::...|.|::|.|..|...:...:.:|| :|...:|.:     |::::|::.:
Human   261 VYGYRGRDCRANLYLLPTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQ 325

  Fly    84 KLLAVVERHSKNGR----YISIYELATLKKRRHLELPSNHRNAEIQQMIFTNDSRSVALITRPPE 144
                 |...:|.|:    ::.|::..:|.....|.|....|.........:|....:..:....:
Human   326 -----VAGTTKEGKPLPPHVRIWDSVSLSTLHVLGLGVFDRAVCCVGFSKSNGGNLLCAVDESND 385

  Fly   145 ETLIMLVLDKTSTVIEGRATIPGSHGGAECIAGNPNDCNFMAVGGER-----TLLLMSKSERGFS 204
            ..|.:....|.:.|::    :..|:........:|.|...:...|:.     ||...|.|:|...
Human   386 HMLSVWDWAKETKVVD----VKCSNEAVLVATFHPTDPTVLITCGKSHIYFWTLEGGSLSKRQGL 446

  Fly   205 ISNNLKVKYRVTSMAFLSLDLLMIGTSDDQLILVENGEQKLAQKASDADTVDLMIDQEVFD---- 265
            ...:.|.|| |..:.||....::.|.|...|.:...|..::.|....|.      |..||.    
Human   447 FEKHEKPKY-VLCVTFLEGGDVVTGDSGGNLYVWGKGGNRITQAVLGAH------DGGVFGLCAL 504

  Fly   266 RDKELQEQRFLPTQAVS--LPDRRVLCMTAFPKGFAYIIFNRAFVFERVSKFKFERKTILTVPTN 328
            ||..|          ||  ..||||:...:                      .:.:...:.||  
Human   505 RDGTL----------VSGGGRDRRVVLWGS----------------------DYSKLQEVEVP-- 535

  Fly   329 LYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILIVPETLKTKQLKFEPLGVLIHTG------- 386
               |....:..:|..| .:|:.|.|:...|..|                    .:|||       
Human   536 ---EDFGPVRTVAEGH-GDTLYVGTTRNSILQG--------------------SVHTGFSLLVQG 576

  Fly   387 ---EIIAMSVCAWKPIIMTASRDQTIRIWNYETALVELVRKFQVDVNIVELSLTGQMAAIG-FSD 447
               |:..::....:...:|..:|:.:.:|:.::......|..:..........:|.:.|:| .:.
Human   577 HVEELWGLATHPSRAQFVTCGQDKLVHLWSSDSHQPLWSRIIEDPARSAGFHPSGSVLAVGTVTG 641

  Fly   448 QLRITQIFMDDLNIVKTYNFPHCNAVRYSNFG-HMMAAAYDNNIAITSV----YKLDVLINLKGH 507
            :..:......||..:.|......:.|.:|..| ::...::||.:.:.:|    .|:..|....||
Human   642 RWLLLDTETHDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVYVYTVDQGGRKVSRLGKCSGH 706

  Fly   508 NGIVLSVAWSRTDKFLISGGAEGAIYLWDIETGARLQEI-VQKGTEYVTISCSTNDPLTIYAGTS 571
            :..:..:.|::.....::...:..|..||..|..::... ..:..|:.|.:|       :.....
Human   707 SSFITHLDWAQDSSCFVTNSGDYEILYWDPATCKQITSADAVRNMEWATATC-------VLGFGV 764

  Fly   572 IGTIREFQDSTLMREITIPSRTKGSVSDV-CLARSDLIMFVADHEGNLFNMQLPFLEAGGGTFTN 635
            .|...|..|.|                |: .:|||        |:|.|.        |....|..
Human   765 FGIWSEGADGT----------------DINAVARS--------HDGKLL--------ASADDFGK 797

  Fly   636 FRFFDGP-----------------VNKLRFSYDGTLLFAISNKGTLAI-W 667
            ...|..|                 |..:.|.:|.::......|.|..: |
Human   798 VHLFSYPCCQPRALSHKYGGHSSHVTNVAFLWDDSMALTTGGKDTSVLQW 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4329NP_611687.1 WD40 repeat 124..167 CDD:293791 4/42 (10%)
WD40 repeat 173..211 CDD:293791 8/42 (19%)
WD40 repeat 215..248 CDD:293791 7/32 (22%)
WD40 repeat 288..324 CDD:293791 1/35 (3%)
WD40 <328..667 CDD:225201 60/374 (16%)
WD40 repeat 338..383 CDD:293791 7/44 (16%)
WD40 384..668 CDD:295369 52/319 (16%)
WD40 repeat 388..426 CDD:293791 4/37 (11%)
WD40 repeat 430..466 CDD:293791 6/36 (17%)
WD40 repeat 470..505 CDD:293791 8/39 (21%)
WD40 repeat 511..548 CDD:293791 5/37 (14%)
WD40 repeat 554..576 CDD:293791 3/21 (14%)
WD40 repeat 597..634 CDD:293791 8/37 (22%)
WD40 repeat 643..669 CDD:293791 5/25 (20%)
Apolipoprotein 701..864 CDD:279749
MSP1_C 784..>1011 CDD:284802
Ax_dynein_light <958..1026 CDD:287215
EML2NP_001180197.1 HELP 220..292 CDD:281450 10/30 (33%)
WD40 277..698 CDD:225201 87/494 (18%)
WD40 300..606 CDD:295369 66/379 (17%)
WD40 repeat 309..355 CDD:293791 7/50 (14%)
WD40 repeat 364..401 CDD:293791 4/36 (11%)
WD40 repeat 411..448 CDD:293791 8/36 (22%)
WD40 repeat 457..493 CDD:293791 7/35 (20%)
WD40 repeat 498..563 CDD:293791 20/102 (20%)
WD40 539..848 CDD:295369 59/368 (16%)
WD40 repeat 582..617 CDD:293791 3/34 (9%)
WD40 repeat 627..659 CDD:293791 5/31 (16%)
WD40 repeat 665..705 CDD:293791 8/39 (21%)
WD40 repeat 710..743 CDD:293791 5/32 (16%)
WD40 repeat 777..814 CDD:293791 10/52 (19%)
WD40 repeat 822..849 CDD:293791 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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