DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4329 and CFAP52

DIOPT Version :9

Sequence 1:NP_611687.1 Gene:CG4329 / 37582 FlyBaseID:FBgn0034745 Length:1171 Species:Drosophila melanogaster
Sequence 2:NP_659491.4 Gene:CFAP52 / 146845 HGNCID:16053 Length:620 Species:Homo sapiens


Alignment Length:757 Identity:141/757 - (18%)
Similarity:245/757 - (32%) Gaps:296/757 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KEVIYPVEGVLAFHDYVQNKQRFLRLPEDTRPEVISISSHRKLLAVVERHSKNGRYISIYELATL 107
            :.:|||:...:........:|.||:          ...::...||:    |::|.||:       
Human    37 EHMIYPLGCTVLIQAINTKEQNFLQ----------GHGNNVSCLAI----SRSGEYIA------- 80

  Fly   108 KKRRHLELPSNHRNAEIQQMIFTNDSRSVALITRPPEETLIMLVLDKTSTVIEGRATIPGSHGGA 172
                         :.::..|.|..|   :.|......|.|..|.|.|               |..
Human    81 -------------SGQVTFMGFKAD---IILWDYKNRELLARLSLHK---------------GKI 114

  Fly   173 ECIAGNPNDCNFMAVGG--ERTLLLMSKSER---------GFSISNNLKVKY-RVTSMAFLS--- 222
            |.:|.:|||...:::||  :.::::.|.::|         |.::.|...|.: |.....|::   
Human   115 EALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFMTAGN 179

  Fly   223 -------LDL-------------------LMIGTSDDQL----------ILVENGEQKLAQKASD 251
                   |||                   :.||..||..          ||..|...||......
Human   180 GTIRVWELDLPNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGDILKMNPRTKLLTDVGP 244

  Fly   252 ADTVDLMIDQEVFDRDKELQEQRFLPTQAVSLPDRRVLCM----TAFPKGFAYIIFNRAFVFERV 312
            |             :||            .||....:.|:    .....|...::|.::..::.:
Human   245 A-------------KDK------------FSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPI 284

  Fly   313 SKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIY-VGILIVPETL------- 369
            .|.:.:.                .|.::.:..:....:|.|....|| |......|||       
Human   285 KKIQLQG----------------GITSITLRGEGHQFLVGTEESHIYRVSFTDFKETLIATCHFD 333

  Fly   370 KTKQLKFEPLGVLIHTGEIIAMSVCAWKPIIMTASRDQTIRIWNYETALVELVRKFQVDVNIVEL 434
            ..:.:.| |.|    |.|:.|  .||.|          .||:| :.::..||:|     :.:..:
Human   334 AVEDIVF-PFG----TAELFA--TCAKK----------DIRVW-HTSSNRELLR-----ITVPNM 375

  Fly   435 SLTGQMAAIGFSDQLRITQIFMDDLNIVKTYNFPHCNAVRYSNFGHMMAAAYDNNIAITSVYKLD 499
            :..|    |.|         ..|..:|:..:           |.|.:.|.|.:..       :|.
Human   376 TCHG----IDF---------MRDGKSIISAW-----------NDGKIRAFAPETG-------RLM 409

  Fly   500 VLINLKGHNGIVLSVAWSRTDKFLISGGAEGAIYLWDIETGARLQEIVQKGTEY-VTISC---ST 560
            .:|| ..|...|.::|.:...|.:||||.||.:.:|.|  |.:.|::.:...|: .::||   ..
Human   410 YVIN-NAHRIGVTAIATTSDCKRVISGGGEGEVRVWQI--GCQTQKLEEALKEHKSSVSCIRVKR 471

  Fly   561 NDPLTIYAGTSIGTI---------------------------REFQ----------------DST 582
            |:...:.|.|. ||.                           .|||                |.|
Human   472 NNEECVTASTD-GTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGT 535

  Fly   583 LMREITIPSRTKGSVSDVCLARSDLIMFVA---DH--------EGNLFNMQLPFLEAGGGTFTNF 636
            ::||  :.....||::.:.:.:.. :.||.   ||        ||.:.::       |.|     
Human   536 VIRE--LEGSLSGSINGMDITQEG-VHFVTGGNDHLVKVWDYNEGEVTHV-------GVG----- 585

  Fly   637 RFFDGPVNKLRFSYDGTLLFAISNKGTLAIWAMDNIEGKVPY 678
              ..|.:.::|.|.....:.::|..|.:..|       |.||
Human   586 --HSGNITRIRISPGNQYIVSVSADGAILRW-------KYPY 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4329NP_611687.1 WD40 repeat 124..167 CDD:293791 9/42 (21%)
WD40 repeat 173..211 CDD:293791 11/48 (23%)
WD40 repeat 215..248 CDD:293791 13/71 (18%)
WD40 repeat 288..324 CDD:293791 4/39 (10%)
WD40 <328..667 CDD:225201 80/404 (20%)
WD40 repeat 338..383 CDD:293791 11/52 (21%)
WD40 384..668 CDD:295369 68/341 (20%)
WD40 repeat 388..426 CDD:293791 10/37 (27%)
WD40 repeat 430..466 CDD:293791 5/35 (14%)
WD40 repeat 470..505 CDD:293791 7/34 (21%)
WD40 repeat 511..548 CDD:293791 13/36 (36%)
WD40 repeat 554..576 CDD:293791 7/51 (14%)
WD40 repeat 597..634 CDD:293791 8/47 (17%)
WD40 repeat 643..669 CDD:293791 5/25 (20%)
Apolipoprotein 701..864 CDD:279749
MSP1_C 784..>1011 CDD:284802
Ax_dynein_light <958..1026 CDD:287215
CFAP52NP_659491.4 WD40 1..405 CDD:225201 90/507 (18%)
WD 1. /evidence=ECO:0000255 62..106 12/70 (17%)
WD40 repeat 68..109 CDD:293791 13/67 (19%)
WD40 100..141 CDD:197651 13/55 (24%)
WD 2. /evidence=ECO:0000255 109..150 12/55 (22%)
WD40 repeat 114..159 CDD:293791 10/44 (23%)
WD 3. /evidence=ECO:0000255 156..195 7/38 (18%)
WD40 repeat 166..201 CDD:293791 5/34 (15%)
WD40 repeat 208..245 CDD:293791 9/36 (25%)
WD40 repeat 253..307 CDD:293791 5/69 (7%)
WD40 277..617 CDD:225201 83/437 (19%)
WD 4. /evidence=ECO:0000255 288..327 8/54 (15%)
WD 5. /evidence=ECO:0000255 330..369 14/56 (25%)
WD40 346..615 CDD:295369 68/345 (20%)
WD 6. /evidence=ECO:0000255 372..411 10/69 (14%)
WD40 repeat 380..414 CDD:293791 11/61 (18%)
WD 7. /evidence=ECO:0000255 415..454 14/40 (35%)
WD40 repeat 420..459 CDD:293791 13/40 (33%)
WD 8. /evidence=ECO:0000255 459..498 8/39 (21%)
WD40 repeat 465..500 CDD:293791 7/35 (20%)
WD 9. /evidence=ECO:0000255 500..539 5/38 (13%)
WD40 repeat 505..541 CDD:293791 7/37 (19%)
WD 10. /evidence=ECO:0000255 543..582 8/39 (21%)
WD40 repeat 549..584 CDD:293791 6/42 (14%)
WD 11. /evidence=ECO:0000255 585..620 10/48 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.