Protein Alignment Vps20 and Vps60

DIOPT Version :10

• Sequence 1: NP_611686.2
• Gene: Vps20 / 37581
• FlyBaseID: FBgn0034744
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_648997.1
• Gene: Vps60 / 39964
• FlyBaseID: FBgn0036740
• Length: 226
• Species: Drosophila melanogaster
• Alignment Length: 239
• Identity: 57/239 - (23%)
• Similarity: 106/239 - (44%)
• Gaps: 47/239 - (19%)

  Fly     1 MGALFGK-TSKKTAPS----------RITDQDKAVLQLKQQRDRLKQYQKRIETQLENDRLLARK 54
            |..|||: ..|:..||          |.|:.::.:..|:.:   |::|::::....|..   |:.
  Fly     1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAE---LRKYREQMSKMREGP---AKN 59

  Fly    55 CLQQGRKDRAKLLLRKKKYQESL--LTNADKQLENLEKLAADIEFAQVEMKVL-DGLKAGNAALK 116
            .::|   ...::|.:||.|::..  |.|....:|.....|..::..|..:..: ||:|    .:|
  Fly    60 SVKQ---KALRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVK----QMK 117

  Fly   117 KVHEMLDIDEVERIMDETREGIEKQQEIDAIL--TDVLTTQDEEDVLAELDALEAE--------- 170
            ..::.::||::|.|.|:..:..|:..|:...|  |..:...|::|:.||||||..|
  Fly   118 TEYKKINIDQIEDIQDDMADMFEQADEVQEALGRTYGMPEVDDDDLQAELDALGDEIALDDDTSY 182

  Fly   171 -EEQQKGAQLPD-VPTEDLPIPAE--IESVE-----EPAKTKAT 205
             ::..|..:.|. .|..|..:|.:  ||:.|     .|...|.|
  Fly   183 LDDVVKAPEAPSREPGADSIVPGKSTIETDEFGLPKIPTSLKTT 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps20	NP_611686.2	Snf7	22..186	CDD:460896	40/179 (22%)
Vps60	NP_648997.1	PTZ00464	1..190	CDD:473916	47/201 (23%)