Protein Alignment Vps20 and Chmp6

DIOPT Version :10

• Sequence 1: NP_611686.2
• Gene: Vps20 / 37581
• FlyBaseID: FBgn0034744
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_001099326.1
• Gene: Chmp6 / 287873
• RGDID: 1565325
• Length: 200
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 104/212 - (49%)
• Similarity: 151/212 - (71%)
• Gaps: 13/212 - (6%)

  Fly     1 MGALFGKTSKKTAPSRITDQDKAVLQLKQQRDRLKQYQKRIETQLENDRLLARKCLQQGRKDRAK 65
            ||.|||:..:    ||:|:||:|:||||||||:|:|||||:..|||.:|.|||:.|:.|||:|||
  Rat     1 MGNLFGRKKQ----SRVTEQDRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRDGRKERAK 61

  Fly    66 LLLRKKKYQESLLTNADKQLENLEKLAADIEFAQVEMKVLDGLKAGNAALKKVHEMLDIDEVERI 130
            |||:||:|:|.||...:.|:.:||.:...|||.|:||||::||:.||..|.|:|:::.|:|||||
  Rat    62 LLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSIEEVERI 126

  Fly   131 MDETREGIEKQQEIDAILTDVLTTQDEEDVLAELDALEAEEEQQKGAQLPDVPTEDLPIPAEIES 195
            :|||:|.:|.|::||.:|....|.:||:.:|.||:|:..|:     .:||:||:|.||    ..|
  Rat   127 LDETQEAVEYQRQIDELLAGSFTQEDEDAILEELNAITQEQ-----IELPEVPSEPLP----DTS 182

  Fly   196 VEEPAKTKATKKVLVEA 212
            .|.|||.::.:..||.|
  Rat   183 PEAPAKARSRQAELVAA 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps20	NP_611686.2	Snf7	22..186	CDD:460896	83/163 (51%)
Chmp6	NP_001099326.1	Snf7	18..177	CDD:460896	83/163 (51%)