DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS16 and RPL4A

DIOPT Version :9

Sequence 1:NP_001286731.1 Gene:RpS16 / 37580 FlyBaseID:FBgn0034743 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_009587.1 Gene:RPL4A / 852319 SGDID:S000000235 Length:362 Species:Saccharomyces cerevisiae


Alignment Length:101 Identity:26/101 - (25%)
Similarity:40/101 - (39%) Gaps:25/101 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIE--PKVLQYKLQEPLLLLGKEKF 65
            :||.....|:       .|||||      .|:...|..:|:|.  |.|:...|:.    :.|.|.
Yeast   117 EKRYATASAI-------AATAVA------SLVLARGHRVEKIPEIPLVVSTDLES----IQKTKE 164

  Fly    66 AGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKY 101
            |...::   :.|.|...:..::   ||.|.|...||
Yeast   165 AVAALK---AVGAHSDLLKVLK---SKKLRAGKGKY 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS16NP_001286731.1 PTZ00086 2..148 CDD:185437 26/101 (26%)
RPL4ANP_009587.1 PTZ00428 2..350 CDD:185611 26/101 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0088
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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