DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS16 and Mrps9

DIOPT Version :10

Sequence 1:NP_611685.1 Gene:RpS16 / 37580 FlyBaseID:FBgn0034743 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001094019.1 Gene:Mrps9 / 301371 RGDID:1306558 Length:390 Species:Rattus norvegicus


Alignment Length:167 Identity:58/167 - (34%)
Similarity:78/167 - (46%) Gaps:49/167 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQKRR--EPVQAVQ---VF----GRKKTATA-VAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQE 55
            :|.|::  ||||..:   .|    ||:|:||| |...:.|:|.:.|||          :.|.|..
  Rat   244 VQSKKQLIEPVQYDEQGMAFSTSEGRRKSATARVVVYQHGSGKIHVNG----------VDYLLYF 298

  Fly    56 PLL------------LLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKK 108
            |:|            |...||.   |:...|||||..||..|||.|::|||.:|..:  ||    
  Rat   299 PILQDREQLMFPFHFLDRLEKH---DVTCTVSGGGRSAQAGAIRLAMAKALCSFITE--DE---- 354

  Fly   109 EIKDILVQYDRT--LLVGDPRRCEPKKFGGPGARARY 143
                  |::.|.  ||..|||..|.||.|..|||.::
  Rat   355 ------VEWMRQAGLLTPDPRIRERKKPGQEGARRKF 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS16NP_611685.1 PTZ00086 2..148 CDD:185437 58/166 (35%)
Mrps9NP_001094019.1 Ribosomal_S9 268..390 CDD:459791 51/143 (36%)

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