DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS16 and rps-16

DIOPT Version :10

Sequence 1:NP_611685.1 Gene:RpS16 / 37580 FlyBaseID:FBgn0034743 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001379167.1 Gene:rps-16 / 179998 WormBaseID:WBGene00004485 Length:144 Species:Caenorhabditis elegans


Alignment Length:140 Identity:106/140 - (75%)
Similarity:126/140 - (90%) Gaps:0/140 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVR 73
            ||:||.|||||||||||:||:|.||:||||||||.:||::|:.||||||||:|||:|..||||:|
 Worm     5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIR 69

  Fly    74 VSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPG 138
            ||||||||||||:|||::|||||:|.|||||.||:|:|:|...||::|||.||||.|.|||||||
 Worm    70 VSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPG 134

  Fly   139 ARARYQKSYR 148
            ||||||||||
 Worm   135 ARARYQKSYR 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS16NP_611685.1 PTZ00086 2..148 CDD:185437 104/138 (75%)
rps-16NP_001379167.1 PTZ00086 1..144 CDD:185437 104/138 (75%)

Return to query results.
Submit another query.