DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS16 and RpL4

DIOPT Version :10

Sequence 1:NP_611685.1 Gene:RpS16 / 37580 FlyBaseID:FBgn0034743 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_312665.4 Gene:RpL4 / 1273663 VectorBaseID:AGAMI1_001853 Length:435 Species:Anopheles gambiae


Alignment Length:168 Identity:41/168 - (24%)
Similarity:67/168 - (39%) Gaps:37/168 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QKRREPVQAVQVFGRKKTATAV--AY----CKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLG 61
            ||.::..|||....|.|....|  .|    .:.|.|.:: |.|.:::..|.:: |...|.|    
Mosquito   162 QKFQKTKQAVTFLRRSKVWADVQKVYKSQRLRAGRGKMR-NRRRVQRRGPLII-YDRDEGL---- 220

  Fly    62 KEKF---AGVD-IRV------RVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKE----IKD 112
            :..|   .||| :||      :::.||||.::....::....|...|..:...:..|:    ...
Mosquito   221 RRAFRNIPGVDTMRVSKMNLLKLAPGGHVGRLCVWTESAFAKLDGLYGTWEKRSVAKKGYNLPTP 285

  Fly   113 ILVQYDRTLLV--GDPRRCEPKKFGGPGARARYQKSYR 148
            |:...|.|.|:  .:.||.         .||..:|.||
Mosquito   286 IMANTDLTRLLKSEEIRRV---------LRAPRRKVYR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS16NP_611685.1 PTZ00086 2..148 CDD:185437 39/166 (23%)
RpL4XP_312665.4 PTZ00428 4..402 CDD:185611 41/168 (24%)

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