DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and AT5G51300

DIOPT Version :10

Sequence 1:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_199943.1 Gene:AT5G51300 / 835204 AraportID:AT5G51300 Length:804 Species:Arabidopsis thaliana


Alignment Length:202 Identity:56/202 - (27%)
Similarity:99/202 - (49%) Gaps:37/202 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DQPT-QDQPTYQP-------RLNEVAQKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIP 70
            |:|. |..|:.:|       |:|....:....|:.||:.:.|:      :|.::          |
plant   180 DRPEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQ------IIKKN----------P 228

  Fly    71 GKEFYADVYHQRPMKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRD 135
            ..:..||   .||.|:.:|:|:|:.:||.:||...|:||:||:.:|::.||..||||:|:.|:::
plant   229 AFKPPAD---YRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKE 290

  Fly   136 RNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDN--DDVWHEQQ 198
            ...:::.....||..   ::||.:.|.     ||....:..|...:.|.|.|.|.  ::...:|.
plant   291 GRHQQKKDLKYDPSE---NEDLHVLVE-----AETQEALEAAAGMVEKLLQPVDEVLNEHKRQQL 347

  Fly   199 RELMEMN 205
            |||..:|
plant   348 RELATLN 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 32/100 (32%)
AT5G51300NP_199943.1 MSL5 <157..360 CDD:227503 56/202 (28%)
KH-I_BBP 240..333 CDD:411805 31/100 (31%)
PTZ00368 <363..405 CDD:173561
PABP-1234 <481..673 CDD:130689
RRM 481..556 CDD:440488
Blue background indicates that the domain is not in the aligned region.

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