DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment nsr and AT4G26480

DIOPT Version :9

Sequence 1:	NP_001286736.1	Gene:	nsr / 37577	FlyBaseID:	FBgn0034740	Length:	340	Species:	Drosophila melanogaster
Sequence 2:	NP_001320071.1	Gene:	AT4G26480 / 828754	AraportID:	AT4G26480	Length:	308	Species:	Arabidopsis thaliana

Alignment Length:	251	Identity:	67/251 - (26%)
Similarity:	119/251 - (47%)	Gaps:	53/251 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    24 QPRLNEVAQKFLADLDEERKRLSAEFP----LCALLIDE------------SVDR---------- 62
            ||......:|:|::|..||.:|:...|    :|.|:..|            |..|
plant    51 QPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENALSQSRFDHPSPLASG 115

  Fly    63 -VFSTGRIPGKEFYADVYHQRP--------------------MKITQKVFVPVNKFPKFNFARKI 106
             :|...|.....:.:....:|.                    :|.|.:|.:||:|:|.:||..::
plant   116 GIFQNSRADMNGWASQFPSERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRL 180

  Fly   107 LGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECY 171
            |||:|||::|::..|:|:::|:||.|::|..||:.:|  |.|.|.||::.|.:.|.|..|.....
plant   181 LGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMR--GKPGYEHLNEPLHILVEAELPIEIVD 243

  Fly   172 ARIAYALAEIRKYLIP-DDNDDVWHEQQ-RELMEMNPESAKKSNGL--NMAPYRSI 223
            ||:..|...:...|.| ::..|.:.:|| |||..:|....::.:.:  :::||.|:
plant   244 ARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSL 299

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nsr	NP_001286736.1	SF1_like-KH	87..206	CDD:239088	45/120 (38%)
AT4G26480	NP_001320071.1	STAR_dimer	61..>93	CDD:406848	9/31 (29%)
AT4G26480	NP_001320071.1	KH-I	159..259	CDD:412160	39/101 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5176
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11208
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910