DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and khdrbs2

DIOPT Version :9

Sequence 1:NP_001286736.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001070758.1 Gene:khdrbs2 / 768147 ZFINID:ZDB-GENE-061013-497 Length:346 Species:Danio rerio


Alignment Length:352 Identity:107/352 - (30%)
Similarity:166/352 - (47%) Gaps:78/352 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KFLADLDEERKRLSAEFPLCALLIDESV-----DRVFSTGRIPGKEFYADVYHQRPMKITQKVFV 92
            |:|.:|..|::.|.|.|.....|:.|.:     |.:...|.:   :.|.|:...:.:|::::|.:
Zfish     5 KYLPELVAEKESLDASFVHAMRLLAEEIEKFEGDELRKDGEV---KKYLDIISNKNIKLSERVLI 66

  Fly    93 PVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDL 157
            ||.::|||||..|:|||:|||::||:|||..|:.|.|:.||||:.||||||.||:.:||||..||
Zfish    67 PVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDL 131

  Fly   158 FLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMN----PESAKKSNGLNM- 217
            .:.:...|||.|.|:|:::||.||:|:|:||.||::..||.|||..:|    |...:.:.|..: 
Zfish   132 HVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSDDPSRGRSARGRGLR 196

  Fly   218 ------------------------APYRSIFDKT--------IGGNRN----GAPKYNNQIRRVT 246
                                    ||..::..:|        :...|.    |.|.|.....:.|
Zfish   197 LTSTASPRGRGSAAPPAPPGRGAAAPRGTVSSRTSVPTPARGVSAPRTRGTAGTPGYRAPSLQAT 261

  Fly   247 ENPRE---VADMEEVEYD------YDEHRMPPSRP-SLGFEYSKPPPSMTATNATPFKRAYPYPT 301
            ....|   ..|..:.|||      ||::....|:. |..:||..........|         |..
Zfish   262 HKTYEDYGYDDGYDGEYDDQSYESYDDNYSNQSKSVSEYYEYGHGNNDENYNN---------YEE 317

  Fly   302 DMNRTREPPIKS---------YKPNPY 319
            |...:| |.:|:         |:.:||
Zfish   318 DWISSR-PNLKAPASRLTRGGYRDHPY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_001286736.1 SF1_like-KH 87..206 CDD:239088 63/122 (52%)
khdrbs2NP_001070758.1 Qua1 6..57 CDD:292891 12/53 (23%)
SF1_like-KH 61..180 CDD:239088 62/118 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..292 19/116 (16%)
Sam68-YY <281..>306 CDD:293176 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590101
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26159
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.810

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