Protein Alignment nsr and how

DIOPT Version :10

• Sequence 1: NP_611682.1
• Gene: nsr / 37577
• FlyBaseID: FBgn0034740
• Length: 340
• Species: Drosophila melanogaster
• Sequence 2: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 66/224 - (29%)
• Similarity: 118/224 - (52%)
• Gaps: 32/224 - (14%)

  Fly     2 ETQSEFTEEQNQDQ------PTQDQPTYQPRLNEVAQKFLADLDEERKRLSA---EFPLCALLID 57
            :.|::..::|...|      |....|..|.:..:....:||.|.::||:|:|   .|.....|:|
  Fly    40 QAQAQAQQQQQAPQVVVPMTPQHLTPQQQQQSTQSIADYLAQLLKDRKQLAAFPNVFTHVERLLD 104

  Fly    58 ESVDRVFSTGRIPGKEFYADVYHQRPMKI----------TQKVFVPVNKFPKFNFARKILGPKGN 112
            |.:      .|:....|..:...:.|:.:          .:||:|||.:.|.|||..:||||:|.
  Fly   105 EEI------ARVRASLFQINGVKKEPLTLPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGM 163

  Fly   113 SVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYA 177
            :.::|::||.|||:::|:.||||:.||:..|  |.|.:.||..||.:.::..........::|.|
  Fly   164 TAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLSDDLHVLITVEDTENRATVKLAQA 226

  Fly   178 LAEIRKYLIP--DDNDDVWHEQQRELMEM 204
            :||::|.|:|  :..|::   ::|:|||:
  Fly   227 VAEVQKLLVPQAEGEDEL---KKRQLMEL 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nsr	NP_611682.1	KH-I_KHDRBS	82..183	CDD:411812	39/110 (35%)
how	NP_001262822.1	STAR_dimer	75..122	CDD:435414	13/52 (25%)
		KH-I_HOW	132..236	CDD:411894	40/105 (38%)