Protein Alignment nsr and khdrbs1b

DIOPT Version :10

• Sequence 1: NP_611682.1
• Gene: nsr / 37577
• FlyBaseID: FBgn0034740
• Length: 340
• Species: Drosophila melanogaster
• Sequence 2: NP_998400.1
• Gene: khdrbs1b / 406516
• ZFINID: ZDB-GENE-040426-2344
• Length: 352
• Species: Danio rerio
• Alignment Length: 307
• Identity: 94/307 - (30%)
• Similarity: 145/307 - (47%)
• Gaps: 59/307 - (19%)

  Fly    29 EVAQKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIPGKEFYADVYHQRPMKITQKVFVP 93
            |...|:|..|..||..|...|.....||...::::.........|.|.|::..:.:|:.:::.:|
Zfish     2 ESENKYLPQLLAERDSLDPSFTHAMKLISAEIEKIEKGDTEKDTESYLDLFTMKNIKLKERILIP 66

  Fly    94 VNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLF 158
            |.::|||||..|||||:||:::||:|||..||.:.|:.||||:|||||||.:|:|:||||..:|.
Zfish    67 VKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELRKNGEPKYAHLSMELH 131

  Fly   159 LEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMN------------------ 205
            :.:...||..:.|.|:|:|:.||:|:|.||..||:..||..|:..:|
Zfish   132 VFIEVFAPVPDAYMRMAHAMEEIKKFLFPDMMDDICQEQFMEMKFLNGGQEHGGRGRGGPPIRGR 196

  Fly   206 ----PESAKKSNGLNMAPYRSIFDKTIGGNRNGAPK----------------------YNNQIRR 244
                |..|.:..|:   |.|       ||.|.|.|:                      .:|:.|.
Zfish   197 GGLPPPGAPRGRGM---PPR-------GGGRGGPPRGGAARGAPAGRGGPSAQLPRGAASNRARP 251

  Fly   245 VTENPREVADMEEVEYDYDEHRMPPSRPSLGFE-----YSKPPPSMT 286
            .......:....:.:..|||:....|....|:|     ||:|..:.|
Zfish   252 PAPGAPRMPPPPQTQESYDEYSYDESYADTGYESYDSYYSQPQAAET 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nsr	NP_611682.1	KH-I_KHDRBS	82..183	CDD:411812	49/100 (49%)
khdrbs1b	NP_998400.1	Qua1	6..56	CDD:465079	12/49 (24%)
		KH-I_KHDRBS1	55..160	CDD:411896	51/104 (49%)
		Sam68-YY	269..318	CDD:465182	10/30 (33%)