Protein Alignment nsr and khdrbs1a

DIOPT Version :10

• Sequence 1: NP_611682.1
• Gene: nsr / 37577
• FlyBaseID: FBgn0034740
• Length: 340
• Species: Drosophila melanogaster
• Sequence 2: NP_571000.1
• Gene: khdrbs1a / 30082
• ZFINID: ZDB-GENE-000210-25
• Length: 370
• Species: Danio rerio
• Alignment Length: 305
• Identity: 92/305 - (30%)
• Similarity: 143/305 - (46%)
• Gaps: 39/305 - (12%)

  Fly    21 PTYQPRLNEVAQ-KFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIPGKEFYADVYHQRPM 84
            |....|.|.... |:|.:|..|:..|.:.|.....|:...::||.........|.|.|::..:.:
Zfish     3 PNSNKRKNNAGDGKYLPELLAEKDSLDSSFTHAMKLLSAEIERVQKGEPKKDSELYLDLFASKSV 67

  Fly    85 KITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPR 149
            ::.::|.:||.::|:|||..|||||:|::::||:|:|..||.:.|:.||||:|||||||..|||:
Zfish    68 RVKERVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKNKEEELRKGGDPK 132

  Fly   150 YAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPESAKKSNG 214
            ||||..:|.:.:...||..:||.|:|:|:.|::|:|:|.:..|          ||:|::......
Zfish   133 YAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPVEGMD----------EMHPDAFMDPGF 187

  Fly   215 LNMAPYRSIFDKTI-GGNRNGAPKYNNQIRRVTENPREVADMEEVEYDYDEHRMPPSRPSLGFEY 278
            ||.|...|...:.: |..|.|.|....:.|                      .|||.....|...
Zfish   188 LNGAQDMSGHGRGMPGRGRGGPPPMGARGR----------------------GMPPRGAPRGGAP 230

  Fly   279 SKPPPSMTATNATPFKRAYPYPTDMNR-----TREPPIKSYKPNP 318
            ...|....|....|..|..|.|....|     ...||.::.:..|
Zfish   231 RGGPGRGAAARGAPAGRGGPQPPTPTRGGAASRSRPPTQAARMTP 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nsr	NP_611682.1	KH-I_KHDRBS	82..183	CDD:411812	47/100 (47%)
khdrbs1a	NP_571000.1	Qua1	16..65	CDD:465079	12/48 (25%)
		KH-I	65..170	CDD:469614	49/104 (47%)
		Sam68-YY	289..340	CDD:465182