DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and Sf1

DIOPT Version :9

Sequence 1:NP_001286736.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001104261.1 Gene:Sf1 / 22668 MGIID:1095403 Length:639 Species:Mus musculus


Alignment Length:342 Identity:79/342 - (23%)
Similarity:145/342 - (42%) Gaps:74/342 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QDQPTQDQPTYQ---PRLNEVAQKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIPGKEF 74
            :|:....:|.|.   .|||....:....|:|||..|..|  :.||                ..:|
Mouse    77 EDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITE--MVAL----------------NPDF 123

  Fly    75 YADVYHQRP-MKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRD--- 135
            .....::.| .:::.||.:|.:::|:.||...::||:||:::.:::|.|.||:|:|:.|:::   
Mouse   124 KPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV 188

  Fly   136 -RNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYL-----IPDDNDDVW 194
             |...:.|....:|.:|.:             .|.....:..|:.:||..|     .|:|.:|:.
Mouse   189 GRKDGQMLPGEDEPLHALV-------------TANTMENVKKAVEQIRNILKQGIETPEDQNDLR 240

  Fly   195 HEQQRELMEMNPESAKKSNGLNMAPY-----RSIFDKTIGGNRNGAPKYNNQIR-RVTENPREVA 253
            ..|.|||..:|....:..|.: :.|:     |||.:.|:.....||....:..: :...:|:...
Mouse   241 KMQLRELARLNGTLREDDNRI-LRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQ 304

  Fly   254 DMEEVEYDY-------DEHRMP-----PSRPSLGFEYSKPPPSMTATNATPFKRAYPYPTDMNRT 306
            |...::.:|       .|..:|     .|.|:.....|.|.|:..|:|..|       |:.|:.|
Mouse   305 DKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPASNPPP-------PSLMSTT 362

  Fly   307 R-EPPIKSYKPN---PY 319
            : .||..:..|:   ||
Mouse   363 QSRPPWMNSGPSENRPY 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_001286736.1 SF1_like-KH 87..206 CDD:239088 33/127 (26%)
Sf1NP_001104261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Nuclear localization signal. /evidence=ECO:0000255 15..19
MSL5 17..257 CDD:227503 50/210 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..94 3/16 (19%)
ZnF_C2HC 278..293 CDD:197667 2/14 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..584 17/62 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.731683 Normalized mean entropy S1317
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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