DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and sfa-1

DIOPT Version :10

Sequence 1:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_503033.1 Gene:sfa-1 / 178486 WormBaseID:WBGene00013808 Length:699 Species:Caenorhabditis elegans


Alignment Length:281 Identity:68/281 - (24%)
Similarity:124/281 - (44%) Gaps:56/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEFTEEQNQDQPTQDQPTYQ---PRLNEVAQKFLADLDEERKRLSAEFPLCALLIDESVDRVFST 66
            ::|...:.:::....:|.|.   .|||         ..|.|||...|     .|..|.:..:...
 Worm   236 ADFGVAEGRERSPSPEPVYDANGKRLN---------TREVRKRQELE-----QLRHEKIQALLKI 286

  Fly    67 GRIPGKEFYADVYHQRPMKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRS 131
            .  |..:..|| |....:::..||::|..:||..||...::||:||:::.|:.||..||:|:|:.
 Worm   287 N--PNFKPPAD-YRAPNIRLHDKVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKG 348

  Fly   132 SMRD---RNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDV 193
            |:::   .|:...:....:|.:|::   ...:::.:....|   :|...:||..  .:| ||:::
 Worm   349 SIKEGKLTNRLGPMPGENEPLHAYV---TGTDMNVIKKACE---KIKQVIAEAT--ALP-DNNEL 404

  Fly   194 WHEQQRELMEMN----PESAKKSNGLNMAPYRSIFDKTIGGNRNGAPKYNNQIR----------- 243
            ...|.|||..:|    ||..  :||...:...|  |:........||...|||:           
 Worm   405 RKLQLRELALLNGTFRPEDL--ANGARCSNCGS--DEHKSWECPDAPNVTNQIKCTNCGAFGHIS 465

  Fly   244 RVTENPREV----ADMEEVEY 260
            :..:||:.:    |.|:: ||
 Worm   466 KDCKNPKGMYASEAGMDD-EY 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 26/103 (25%)
sfa-1NP_503033.1 MSL5 185..422 CDD:227503 51/211 (24%)
PTZ00368 <427..>471 CDD:173561 8/45 (18%)

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