DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and gld-1

DIOPT Version :9

Sequence 1:NP_001286736.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_492143.1 Gene:gld-1 / 172532 WormBaseID:WBGene00001595 Length:463 Species:Caenorhabditis elegans


Alignment Length:365 Identity:97/365 - (26%)
Similarity:162/365 - (44%) Gaps:91/365 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TQDQPTYQPRLNEVAQ-----KFLADLDEERKRLSA---EFPLCALLIDESVDRV----FST--G 67
            :.|:..:.|...|..:     ::||||.:|:|.|:.   .|.....|:|:.:.||    |.|  .
 Worm   127 SMDKSLFSPTATEPIEVEATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFP 191

  Fly    68 RIPGKEFYADVYHQRPMKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSS 132
            |:...|...|:     :.||:|::||.|::|.:||..:||||:|.:.::|:::|.|||:::|:.|
 Worm   192 RVELPEPAGDM-----ISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGS 251

  Fly   133 MRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLI--PDDNDDVWH 195
            |||::||...|  |...:.||..||.:.|.........:.::..||.:::|.||  |:..|::..
 Worm   252 MRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKR 314

  Fly   196 EQQRELMEMN--------PESAKKSNG---LNMAPYRS----IFDKTIGGNRNGAPK--YNNQIR 243
            :|..||..:|        |..|:....   |:..|.||    :...|.|   :|.|.  :...|.
 Worm   315 KQLMELAIINGTYRPMKSPNPARVMTAVPLLSPTPLRSSGPVLMSPTPG---SGLPSTTFGGSIL 376

  Fly   244 RVTENPREVADMEEVEYDYDEHRMPPSRPSLG---FEYSKPPPSM--------TATNATPFKRAY 297
            ..|.....:                     ||   |:||...|||        .|::.|     :
 Worm   377 SPTLTASNL---------------------LGSNVFDYSLLSPSMFDSFSSLQLASDLT-----F 415

  Fly   298 P-YPTDMNRTREPPIKSYKPNPYTILNKYIN----NRAPS 332
            | |||..:.     :.|: |..:|..:.:.|    |.:||
 Worm   416 PKYPTTTSF-----VNSF-PGLFTSASSFANQTNTNVSPS 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_001286736.1 SF1_like-KH 87..206 CDD:239088 43/128 (34%)
gld-1NP_492143.1 STAR_dimer 144..190 CDD:293152 14/45 (31%)
SF1_like-KH 206..328 CDD:239088 43/123 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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