DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and Khdrbs2

DIOPT Version :10

Sequence 1:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_573498.1 Gene:Khdrbs2 / 170771 MGIID:2159649 Length:349 Species:Mus musculus


Alignment Length:296 Identity:98/296 - (33%)
Similarity:149/296 - (50%) Gaps:63/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QKFLADLDEERKRLSAEFPLCALLIDESVDRV-FSTGRIPGKE-FYADVYHQRPMKITQKVFVPV 94
            :|:|.:|..|:..|...|...:.|:.|.:::. .|.|:...:| .|.||...:.:|::::|.:||
Mouse     4 EKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPV 68

  Fly    95 NKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLFL 159
            .::|||||..|:|||:|||::||:|||..|:.|.|:.||||:.||||||.||:.:||||..:|.:
Mouse    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHV 133

  Fly   160 EVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMN-PESAKKSNGLNMAPYRSI 223
            .:...|||.|.|:|:::||.||:|:|:||.||::..||.|||..:| .|.:.:..|:.   .|.|
Mouse   134 LIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEESGRGRGIR---GRGI 195

  Fly   224 FDKTIGGNRNGAPKYNNQIRRVTENPREVADMEEVEYDYDEHRMPPSRPSLGFEYSKPPPS---- 284
                                                      |:.|:.||.|...:.|||.    
Mouse   196 ------------------------------------------RITPTAPSRGRGGAVPPPPPPGR 218

  Fly   285 --MTATNATPFKRAYPYPTDMNRTREPPIKSYKPNP 318
              :|....|..:.|.|.         |||....|.|
Mouse   219 GVLTPRGTTVTRGALPV---------PPIARGVPTP 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 51/100 (51%)
Khdrbs2NP_573498.1 Qua1 5..57 CDD:465079 14/51 (27%)
KH-I_KHDRBS2 54..171 CDD:411897 57/116 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..263 21/119 (18%)
Sam68-YY 267..321 CDD:465182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..349
Blue background indicates that the domain is not in the aligned region.

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