DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and Khdrbs3

DIOPT Version :10

Sequence 1:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_034288.2 Gene:Khdrbs3 / 13992 MGIID:1313312 Length:346 Species:Mus musculus


Alignment Length:327 Identity:112/327 - (34%)
Similarity:156/327 - (47%) Gaps:44/327 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIPGKEFYADVYHQRPMKITQKVFVPVNK 96
            :|:|.:|..|:..|...|.....|::..::: |..|....:|.|.||...:.||:.|||.:||.:
Mouse     3 EKYLPELMAEKDSLDPSFTHALRLVNREIEK-FQKGEGKEEEKYIDVVINKNMKLGQKVLIPVKQ 66

  Fly    97 FPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLFLEV 161
            ||||||..|:|||:|||::||:|||..|:.|.|:.||||:.||||||.||:.:|.||:.||.:.:
Mouse    67 FPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 131

  Fly   162 SAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPESAKKS----NGLNMAPYRS 222
            ...|||||.|||:.:||.||:|:||||.||::...|.:||..:|..|....    .|.:....|.
Mouse   132 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKSTLRTRG 196

  Fly   223 IFDKTIGGNRNG--APKYNNQIRRVTENPREVADMEEVEYDYDEHRMPPSR------------PS 273
            :....|...|.|  |......:.|.|..||.|...          |.|.||            |.
Mouse   197 VTTPAITRGRGGVTARPVAVGVPRGTPTPRGVLST----------RGPVSRGRGLLTPRARGVPP 251

  Fly   274 LGFEYSKPPPSMTATNATPFKRAYPYPTDMNRTREPPIKSYKPNPYTILNKYINNRAPSDFVAQR 338
            .|:....|||:........:...|....|     |....|| .|.|:         .|:...|..
Mouse   252 TGYRPPPPPPTQETYGEYDYDDGYGTAYD-----EQSYDSY-DNSYS---------TPAQSAADY 301

  Fly   339 YN 340
            |:
Mouse   302 YD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 57/100 (57%)
Khdrbs3NP_034288.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 75/157 (48%)
Qua1 4..53 CDD:465079 13/49 (27%)
KH-I_KHDRBS3 48..160 CDD:411898 63/111 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..266 14/63 (22%)
Sam68-YY 266..320 CDD:465182 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..346
Blue background indicates that the domain is not in the aligned region.

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