DRSC/TRiP Functional Genomics Resources

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Protein Alignment nsr and KHDRBS3

DIOPT Version :10

Sequence 1:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_006549.1 Gene:KHDRBS3 / 10656 HGNCID:18117 Length:346 Species:Homo sapiens


Alignment Length:307 Identity:109/307 - (35%)
Similarity:151/307 - (49%) Gaps:35/307 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIPGKEFYADVYHQRPMKITQKVFVPVNK 96
            :|:|.:|..|:..|...|.....|:::.::: |..|....:|.|.||...:.||:.|||.:||.:
Human     3 EKYLPELMAEKDSLDPSFTHALRLVNQEIEK-FQKGEGKDEEKYIDVVINKNMKLGQKVLIPVKQ 66

  Fly    97 FPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMRDRNKEEELRSSGDPRYAHLHKDLFLEV 161
            ||||||..|:|||:|||::||:|||..|:.|.|:.||||:.||||||.||:.:|.||:.||.:.:
Human    67 FPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 131

  Fly   162 SAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPESAKKS----NGLNMAPYRS 222
            ...|||||.|||:.:||.||:|:||||.||::...|.:||..:|..|....    .|......|.
Human   132 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKPTLRTRG 196

  Fly   223 IFDKTIGGNRNG--APKYNNQIRRVTENPREVADMEEVEYDYDEHRMPPSR------------PS 273
            :....|...|.|  |......:.|.|..||.|...          |.|.||            |.
Human   197 VPAPAITRGRGGVTARPVGVVVPRGTPTPRGVLST----------RGPVSRGRGLLTPRARGVPP 251

  Fly   274 LGFEYSKPPPSMTATNATPFKRAYPYPTDMNRTREPPIKSYKPNPYT 320
            .|:....|||:........:...|....|     |....|| .|.|:
Human   252 TGYRPPPPPPTQETYGEYDYDDGYGTAYD-----EQSYDSY-DNSYS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 57/100 (57%)
KHDRBS3NP_006549.1 Involved in homodimerization. /evidence=ECO:0000269|PubMed:26758068 1..160 75/157 (48%)
Qua1 4..53 CDD:465079 13/49 (27%)
KH-I_KHDRBS3 48..160 CDD:411898 63/111 (57%)
Interaction with SIAH1. /evidence=ECO:0000269|PubMed:15163637 212..251 9/48 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..267 14/63 (22%)
Sam68-YY 266..320 CDD:465182 7/33 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..346
Blue background indicates that the domain is not in the aligned region.

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