DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3927 and SF1

DIOPT Version :9

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001365886.1 Gene:SF1 / 7536 HGNCID:12950 Length:764 Species:Homo sapiens


Alignment Length:232 Identity:57/232 - (24%)
Similarity:106/232 - (45%) Gaps:43/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSELTEKQNQDQPTYQ---PRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIP 65
            |....::....:|.|.   .|||....:....|:.||..|..|  :.||              .|
Human   198 PPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITE--MVAL--------------NP 246

  Fly    66 GKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRD 130
            ..:|.|| |:....::..||.:|.:::|:.||.|.::||:||:|:.:::|.:.||:|:|:.|:::
Human   247 DFKPPAD-YKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKE 310

  Fly   131 ----RNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYL-----IPDDND 186
                |...:.|....:|.:|.:             .|.....:..|:.:||..|     .|:|.:
Human   311 GKVGRKDGQMLPGEDEPLHALV-------------TANTMENVKKAVEQIRNILKQGIETPEDQN 362

  Fly   187 DVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAI 223
            |:...|.|||..:|....:..|.: :.|::|:..::|
Human   363 DLRKMQLRELARLNGTLREDDNRI-LRPWQSSETRSI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 SF1_like-KH 83..201 CDD:239088 34/126 (27%)
SF1NP_001365886.1 MSL5 142..382 CDD:227503 53/213 (25%)
ZnF_C2HC 403..418 CDD:197667
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.731683 Normalized mean entropy S1317
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.760

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